RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PATE1Q8WXA2 126 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 PGLYRP3Q96LB9 341 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 NDC1Q9BTX1 674 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 TMEM168Q9H0V1 697 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 KIR3DX1Q9H7L2 352 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 ERVMER34-1Q9H9K5 563 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 OR6C2Q9NZP2 312 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 COLEC10Q9Y6Z7 277 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 PLPP2O43688 288 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 PTBP1P26599 531 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 SLC36A2Q495M3 483 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 FHL5Q5TD97 284 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 DGAT2L6Q6ZPD8 337 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 IZUMO1Q8IYV9 350 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 BEST4Q8NFU0 473 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 ACOT12Q8WYK0 555 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 ZMYND19Q96E35 227 aaPredicted RBP16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 BEX1Q9HBH7 125 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 LRRN3E7EW58 273 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ARHGEF9O43307 516 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CHP2O43745 196 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 NPR2P20594 1047 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CFL1P23528 166 aaKnown RBP16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ATP12AP54707 1039 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 RPS15AP62244 130 aaKnown RBP16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 DGCR2P98153 550 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 MRPL28Q13084 256 aaKnown RBP16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 FCRL6Q6DN72 434 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 FAAH2Q6GMR7 532 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 PLCZ1Q86YW0 608 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 OR11H7Q8NGC8 314 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CREB3L1Q96BA8 519 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 LRRN3Q9H3W5 708 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 C19orf53Q9UNZ5 99 aaPredicted RBP16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 TRIOO75962 3097 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 FAM86C2PA6NEL3 165 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 SOX30O94993 753 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ADH1BP00325 375 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 SMIM10L1P0DMW3 83 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CXCL3P19876 107 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 F8A1P23610 371 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ACSL1P33121 698 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CCR6P51684 374 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 BDH1Q02338 343 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 PRRT3Q5FWE3 981 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 GARNL3Q5VVW2 1013 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 LYPD4Q6UWN0 246 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 USP53Q70EK8 1073 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 SLC44A3Q8N4M1 653 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 ZNRF4Q8WWF5 429 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 SMIM10Q96HG1 83 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 SLC22A7Q9Y694 548 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 CACNG2Q9Y698 323 aa16.72■□□□□ 0.27
PTP4A3-202ENST00000349124 B3GALT2O43825 422 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 BMP8BP34820 402 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ACTR1BP42025 376 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 MAGEB1P43366 347 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ACTR1AP61163 376 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 TFF2Q03403 129 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 SUZ12Q15022 739 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 BMP8AQ7Z5Y6 402 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 OR4N2Q8NGD1 307 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 FN3KQ9H479 309 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 IGFLR1Q9H665 355 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ZNF222Q9UK12 451 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 MED31Q9Y3C7 131 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ALPK2Q86TB3 2170 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 SPTBP11277 2137 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 PTP4A3O75365 173 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 RCBTB2O95199 551 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 DBIP07108 87 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 CTSBP07858 339 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ANKRD34CP0C6C1 535 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ATF1P18846 271 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 GIFP27352 417 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 LSSP48449 732 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 ADPRHP54922 357 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 SHC2P98077 582 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 AMZ1Q400G9 498 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 GXYLT1Q4G148 440 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 EIPR1Q53HC9 387 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 FRMD1Q8N878 549 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 OR11H4Q8NGC9 324 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 OR4K13Q8NH42 304 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 OR4C6Q8NH72 309 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 TM4SF19Q96DZ7 209 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 SERINC2Q96SA4 455 aa16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 GTPBP2Q9BX10 602 aaKnown RBP16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 KRCC1Q9NPI7 259 aaPredicted RBP16.71■□□□□ 0.27
PTP4A3-202ENST00000349124 OR6C74A6NCV1 312 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 MEN1O00255 615 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 HCRTR1O43613 425 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 APODP05090 189 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 THBS1P07996 1170 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 GALP22466 123 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 GDI1P31150 447 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms