RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CSTAP01040 98 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 HTR1AP08908 422 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 MPC1LP0DKB6 136 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF16P17020 682 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 GRPRP30550 384 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR4D2P58180 307 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 HNRNPKP61978 463 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 PLCXD2Q0VAA5 305 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CDHR3Q6ZTQ4 885 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF546Q86UE3 836 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CMTM3Q96MX0 182 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR1F2PQ96R84 312 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 WWTR1Q9GZV5 400 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 A6NCN8 305 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 PTP4A3O75365 173 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 FGF4P08620 206 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ADRB3P13945 408 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CEBPBP17676 345 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SNCAP37840 140 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 MS4A2Q01362 244 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SPHARQ15513 63 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CATSPEREQ5SY80 951 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM217AQ8IXS0 508 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR51G2Q8NGK0 314 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR2G2Q8NGZ5 317 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 DEFB126Q9BYW3 111 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 METTL9Q9H1A3 318 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 MAGIXQ9H6Y5 334 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 KCNK12Q9HB15 430 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC6A20Q9NP91 592 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ACOT13Q9NPJ3 140 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 GPR83Q9NYM4 423 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 HCSTQ9UBK5 93 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 IGKV6-21A0A0C4DH24 114 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 A0A1B0GV50 99 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 AQP7O14520 342 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 VEGFDO43915 354 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 GIFP27352 417 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 GABRB3P28472 473 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 TIA1P31483 386 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■■□ 25.2
SMARCE1-202ENST00000348513 AKR1C2P52895 323 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 RAB1AP62820 205 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ZXDBP98169 803 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SORDQ00796 357 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SGCAQ16586 387 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 TSPYL5Q86VY4 417 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 IL17RDQ8NFM7 739 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR51A7Q8NH64 312 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 GNPDA2Q8TDQ7 276 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM3CQ92520 227 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 BPIFA2Q96DR5 249 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 FIZ1Q96SL8 496 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 LRRTM2O43300 516 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SEMA4FO95754 770 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CTSAP10619 480 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CD1EP15812 388 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 IL1RNP18510 177 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ANXA7P20073 488 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 RBMS1P29558 406 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SOX2P48431 317 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CCR6P51684 374 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CASP6P55212 293 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM31Q5JXX7 168 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 MEDAGQ5VYS4 303 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR2D3Q8NGH3 330 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 HUS1BQ8NHY5 278 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CHFRQ96EP1 664 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 CMSS1Q9BQ75 279 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC17A9Q9BYT1 436 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 LYRM2Q9NU23 88 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 IGKV6D-21A0A0A0MT36 114 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM210A6NLX4 147 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 ITGAMP11215 1152 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SPINT3P49223 89 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 RBM39Q14498 530 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 IQCJQ1A5X6 159 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 AAK1Q2M2I8 961 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 PTP4A1Q93096 173 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 LRIG1Q96JA1 1093 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 OR52A5Q9H2C5 316 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 PCDHGA2Q9Y5H1 932 aa10.43□□□□□ -0.74
SMARCE1-202ENST00000348513 SDHDO14521 159 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OTX2P32243 289 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 DUSP3P51452 185 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 HHEXQ03014 270 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 PLA2G7Q13093 441 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF691Q5VV52 312 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 RNF111Q6ZNA4 994 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 C15orf39Q6ZRI6 1047 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 MFSD6LQ8IWD5 586 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF689Q96CS4 500 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NECTIN4Q96NY8 510 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NELFAQ9H3P2 528 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms