RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC6A8P48029 635 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 TMED10P49755 219 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 P2RX1P51575 399 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 CXCR4P61073 352 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 COPZ1P61923 177 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 EFNB1P98172 346 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 C17orf67Q0P5P2 114 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 IL10RAQ13651 578 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 KCTD21Q4G0X4 260 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 TMEM236Q5W0B7 351 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 TMEM154Q6P9G4 183 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 ISLR2Q6UXK2 745 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 MRGPREQ86SM8 312 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 MEX3DQ86XN8 651 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 ENTHD1Q8IYW4 607 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 PFN4Q8NHR9 129 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 GPR119Q8TDV5 335 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 PSMF1Q92530 271 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 HDAC2Q92769 488 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 SPACA9Q96E40 222 aaPredicted RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 FAM46AQ96IP4 442 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 APOL4Q9BPW4 351 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 C12orf10Q9HB07 376 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 CNIH4Q9P003 139 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 RPS6KB2Q9UBS0 482 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 FBXL4Q9UKA2 621 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 MRPS18BQ9Y676 258 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 PCSK5Q92824 1860 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 FREM2Q5SZK8 3169 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 IGLV3-32A0A0A0MS00 114 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 HCRTR2O43614 444 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 WBP4O75554 376 aaKnown RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 IGF2P01344 180 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SERPINA7P05543 415 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 CCDC159P0C7I6 412 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SMIM18P0DKX4 95 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 PGCP20142 388 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 MAKP20794 623 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ELK4P28324 431 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SOX3P41225 446 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 CASP3P42574 277 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 DLX5P56178 289 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 NUP107P57740 925 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 MAD2L1BPQ15013 274 aaPredicted RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 TOMM34Q15785 309 aaPredicted RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 RBM48Q5RL73 367 aaKnown RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 C12orf73Q69YU5 71 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ACSM5Q6NUN0 579 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 OPN5Q6U736 354 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ZNF786Q8N393 782 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 CADM2Q8N3J6 435 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 CLDN22Q8N7P3 220 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 OR10G3Q8NGC4 313 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 OR5M3Q8NGP4 307 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ZNF566Q969W8 418 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SH3YL1Q96HL8 342 aaPredicted RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 FRMD6Q96NE9 622 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 IP6K3Q96PC2 410 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SECISBP2Q96T21 854 aaKnown RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 ING2Q9H160 280 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 DSN1Q9H410 356 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SH2D2AQ9NP31 389 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ATP13A2Q9NQ11 1180 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 C20orf141Q9NUB4 165 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 ZNF226Q9NYT6 803 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 AASSQ9UDR5 926 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 SCOCQ9UIL1 159 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 RNF6Q9Y252 685 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 TMEM5Q9Y2B1 443 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 MED31Q9Y3C7 131 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 CHCHD2Q9Y6H1 151 aaPredicted RBP10.01□□□□□ -0.81
ECM1-201ENST00000346569 CFAP47Q6ZTR5 3102 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 PCNX3Q9H6A9 2034 aa10.01□□□□□ -0.81
ECM1-201ENST00000346569 PTPRBP23467 1997 aa10□□□□□ -0.81
ECM1-201ENST00000346569 IGKV1D-42A0A075B6H8 117 aa10□□□□□ -0.81
ECM1-201ENST00000346569 DCDC2BA2VCK2 349 aa10□□□□□ -0.81
ECM1-201ENST00000346569 HTR3EA5X5Y0 456 aa10□□□□□ -0.81
ECM1-201ENST00000346569 C2orf72A6NCS6 295 aa10□□□□□ -0.81
ECM1-201ENST00000346569 SCO2O43819 266 aa10□□□□□ -0.81
ECM1-201ENST00000346569 SOX14O95416 240 aa10□□□□□ -0.81
ECM1-201ENST00000346569 TFAP2AP05549 437 aa10□□□□□ -0.81
ECM1-201ENST00000346569 PNMTP11086 282 aa10□□□□□ -0.81
ECM1-201ENST00000346569 IFI30P13284 250 aa10□□□□□ -0.81
ECM1-201ENST00000346569 CRHBPP24387 322 aa10□□□□□ -0.81
ECM1-201ENST00000346569 POU1F1P28069 291 aa10□□□□□ -0.81
ECM1-201ENST00000346569 MSX1P28360 303 aa10□□□□□ -0.81
ECM1-201ENST00000346569 GPR4P46093 362 aa10□□□□□ -0.81
ECM1-201ENST00000346569 TPD52P55327 224 aaPredicted RBP10□□□□□ -0.81
ECM1-201ENST00000346569 FXYD6P3P58550 94 aa10□□□□□ -0.81
ECM1-201ENST00000346569 IL5RAQ01344 420 aa10□□□□□ -0.81
ECM1-201ENST00000346569 TEKQ02763 1124 aa10□□□□□ -0.81
ECM1-201ENST00000346569 SNTA1Q13424 505 aa10□□□□□ -0.81
ECM1-201ENST00000346569 TOP3AQ13472 1001 aaPredicted RBP10□□□□□ -0.81
ECM1-201ENST00000346569 FHL1Q13642 323 aa10□□□□□ -0.81
ECM1-201ENST00000346569 APOFQ13790 326 aa10□□□□□ -0.81
ECM1-201ENST00000346569 RTP5Q14D33 572 aa10□□□□□ -0.81
ECM1-201ENST00000346569 BICRALQ6AI39 1079 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms