RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 TMEM38AQ9H6F2 299 aa13.67□□□□□ -0.22
RET-201ENST00000340058 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
RET-201ENST00000340058 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
RET-201ENST00000340058 TEX13CA0A0J9YWL9 993 aa13.67□□□□□ -0.22
RET-201ENST00000340058 HPGDSO60760 199 aa13.67□□□□□ -0.22
RET-201ENST00000340058 MOSPD3O75425 235 aa13.67□□□□□ -0.22
RET-201ENST00000340058 IL33O95760 270 aa13.67□□□□□ -0.22
RET-201ENST00000340058 CD3GP09693 182 aa13.67□□□□□ -0.22
RET-201ENST00000340058 BMP4P12644 408 aa13.67□□□□□ -0.22
RET-201ENST00000340058 TEAD1P28347 426 aa13.67□□□□□ -0.22
RET-201ENST00000340058 RPS25P62851 125 aaKnown RBP13.67□□□□□ -0.22
RET-201ENST00000340058 ACTC1P68032 377 aa13.67□□□□□ -0.22
RET-201ENST00000340058 ACTA1P68133 377 aa13.67□□□□□ -0.22
RET-201ENST00000340058 ZNF227Q86WZ6 799 aa13.67□□□□□ -0.22
RET-201ENST00000340058 OR8H3Q8N146 312 aa13.67□□□□□ -0.22
RET-201ENST00000340058 TMEM163Q8TC26 289 aa13.67□□□□□ -0.22
RET-201ENST00000340058 NXPE2Q96DL1 559 aa13.67□□□□□ -0.22
RET-201ENST00000340058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.22
RET-201ENST00000340058 OR10A5Q9H207 317 aa13.67□□□□□ -0.22
RET-201ENST00000340058 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
RET-201ENST00000340058 SIRT5Q9NXA8 310 aa13.67□□□□□ -0.22
RET-201ENST00000340058 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
RET-201ENST00000340058 OBP2AQ9NY56 170 aa13.67□□□□□ -0.22
RET-201ENST00000340058 ACOD1A6NK06 481 aa13.66□□□□□ -0.22
RET-201ENST00000340058 EEF1A2Q05639 463 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 PRSS41Q7RTY9 318 aa13.66□□□□□ -0.22
RET-201ENST00000340058 PAQR7Q86WK9 346 aa13.66□□□□□ -0.22
RET-201ENST00000340058 PIGUQ9H490 435 aa13.66□□□□□ -0.22
RET-201ENST00000340058 RASD1Q9Y272 281 aa13.66□□□□□ -0.22
RET-201ENST00000340058 SIT1Q9Y3P8 196 aa13.66□□□□□ -0.22
RET-201ENST00000340058 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
RET-201ENST00000340058 RGS9O75916 674 aaPredicted RBP13.66□□□□□ -0.22
RET-201ENST00000340058 RPS27P42677 84 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 TFF2Q03403 129 aa13.66□□□□□ -0.22
RET-201ENST00000340058 HSF2Q03933 536 aa13.66□□□□□ -0.22
RET-201ENST00000340058 RASGEF1BQ0VAM2 473 aa13.66□□□□□ -0.22
RET-201ENST00000340058 BORAQ6PGQ7 559 aa13.66□□□□□ -0.22
RET-201ENST00000340058 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
RET-201ENST00000340058 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
RET-201ENST00000340058 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 CCDC120Q96HB5 630 aa13.66□□□□□ -0.22
RET-201ENST00000340058 CACNG6Q9BXT2 260 aa13.66□□□□□ -0.22
RET-201ENST00000340058 PLEKHA6Q9Y2H5 1048 aa13.66□□□□□ -0.22
RET-201ENST00000340058 A0A1W2PQ09 198 aa13.66□□□□□ -0.22
RET-201ENST00000340058 OR5K3A6NET4 321 aa13.66□□□□□ -0.22
RET-201ENST00000340058 NPIPA2E9PIF3 369 aa13.66□□□□□ -0.22
RET-201ENST00000340058 NPIPA3F8WFD2 350 aa13.66□□□□□ -0.22
RET-201ENST00000340058 CD40LGP29965 261 aa13.66□□□□□ -0.22
RET-201ENST00000340058 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 RUNX2Q13950 521 aa13.66□□□□□ -0.22
RET-201ENST00000340058 CEP76Q8TAP6 659 aa13.66□□□□□ -0.22
RET-201ENST00000340058 DNAJA4Q8WW22 397 aaPredicted RBP13.66□□□□□ -0.22
RET-201ENST00000340058 RBM24Q9BX46 236 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 SLC6A20Q9NP91 592 aa13.66□□□□□ -0.22
RET-201ENST00000340058 UBQLN4Q9NRR5 601 aa13.66□□□□□ -0.22
RET-201ENST00000340058 NUFIP1Q9UHK0 495 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 GRIP1Q9Y3R0 1128 aa13.66□□□□□ -0.22
RET-201ENST00000340058 SRPX2O60687 465 aaPredicted RBP13.66□□□□□ -0.22
RET-201ENST00000340058 CSTBP04080 98 aaKnown RBP13.66□□□□□ -0.22
RET-201ENST00000340058 COL9A1P20849 921 aa13.66□□□□□ -0.22
RET-201ENST00000340058 CASRP41180 1078 aa13.66□□□□□ -0.22
RET-201ENST00000340058 SEC23BQ15437 767 aa13.66□□□□□ -0.22
RET-201ENST00000340058 NTRK2Q16620 822 aa13.66□□□□□ -0.22
RET-201ENST00000340058 NKAPLQ5M9Q1 402 aa13.66□□□□□ -0.22
RET-201ENST00000340058 OR7E24Q6IFN5 339 aa13.66□□□□□ -0.22
RET-201ENST00000340058 KCTD9Q7L273 389 aa13.66□□□□□ -0.22
RET-201ENST00000340058 SFTPA2Q8IWL1 248 aa13.66□□□□□ -0.22
RET-201ENST00000340058 LAX1Q8IWV1 398 aa13.66□□□□□ -0.22
RET-201ENST00000340058 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
RET-201ENST00000340058 SFXN5Q8TD22 340 aa13.66□□□□□ -0.22
RET-201ENST00000340058 DHDHQ9UQ10 334 aa13.66□□□□□ -0.22
RET-201ENST00000340058 CACNA1HO95180 2353 aa13.65□□□□□ -0.22
RET-201ENST00000340058 TMEM72A0PK05 275 aa13.65□□□□□ -0.22
RET-201ENST00000340058 AGAP5A6NIR3 686 aa13.65□□□□□ -0.22
RET-201ENST00000340058 GTF2F2P13984 249 aa13.65□□□□□ -0.22
RET-201ENST00000340058 GABRG2P18507 467 aa13.65□□□□□ -0.22
RET-201ENST00000340058 TACR3P29371 465 aa13.65□□□□□ -0.22
RET-201ENST00000340058 NR4A2P43354 598 aa13.65□□□□□ -0.22
RET-201ENST00000340058 RAB38P57729 211 aa13.65□□□□□ -0.22
RET-201ENST00000340058 SRSF5Q13243 272 aaKnown RBP13.65□□□□□ -0.22
RET-201ENST00000340058 OR6C1Q96RD1 312 aa13.65□□□□□ -0.22
RET-201ENST00000340058 UBQLN3Q9H347 655 aa13.65□□□□□ -0.22
RET-201ENST00000340058 TRBV11-1A0A0K0K1C0 115 aa13.65□□□□□ -0.22
RET-201ENST00000340058 A0A1W2PS29 197 aa13.65□□□□□ -0.22
RET-201ENST00000340058 APEHP13798 732 aaKnown RBP13.65□□□□□ -0.22
RET-201ENST00000340058 WNT3P56703 355 aa13.65□□□□□ -0.22
RET-201ENST00000340058 SLC35A2P78381 396 aa13.65□□□□□ -0.22
RET-201ENST00000340058 ILKQ13418 452 aa13.65□□□□□ -0.22
RET-201ENST00000340058 SNTA1Q13424 505 aa13.65□□□□□ -0.22
RET-201ENST00000340058 PDE7AQ13946 482 aa13.65□□□□□ -0.22
RET-201ENST00000340058 ZNF793Q6ZN11 406 aa13.65□□□□□ -0.22
RET-201ENST00000340058 DCDC5Q6ZRR9 648 aa13.65□□□□□ -0.22
RET-201ENST00000340058 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
RET-201ENST00000340058 FAM71F1Q96KD3 344 aaPredicted RBP13.65□□□□□ -0.22
RET-201ENST00000340058 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
RET-201ENST00000340058 SDF2Q99470 211 aa13.65□□□□□ -0.22
RET-201ENST00000340058 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
RET-201ENST00000340058 PAQR5Q9NXK6 330 aaPredicted RBP13.65□□□□□ -0.22
RET-201ENST00000340058 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.65□□□□□ -0.22
RET-201ENST00000340058 HCCSP53701 268 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms