RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 CDH20Q9HBT6 801 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 A0A1B0GWA3 101 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 FTCDNL1E5RQL4 147 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 DRD3P35462 400 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 DUSP5Q16690 384 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 AKIRIN2Q53H80 203 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 EID2BQ96D98 161 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 FAM71F1Q96KD3 344 aaPredicted RBP13.21□□□□□ -0.3
PARVB-201ENST00000338758 URM1Q9BTM9 101 aaKnown RBP13.21□□□□□ -0.3
PARVB-201ENST00000338758 ATP13A2Q9NQ11 1180 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 STUB1Q9UNE7 303 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 PPIL1Q9Y3C6 166 aa13.21□□□□□ -0.3
PARVB-201ENST00000338758 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 ETHE1O95571 254 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 CD160O95971 181 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SNU13P55769 128 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 HLA-BQ31612 363 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 ABHD11Q8NFV4 315 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 INTS14Q96SY0 518 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 TWSG1Q9GZX9 223 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 DPAGT1Q9H3H5 408 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 LRRN3Q9H3W5 708 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 NSA2O95478 260 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 DPP4P27487 766 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 TRHRP34981 398 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 BOLLQ8N9W6 283 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 ARRB2P32121 409 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 LSM14AQ8ND56 463 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 OR5AK2Q8NH90 309 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 SPRYD4Q8WW59 207 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 EDEM2Q9BV94 578 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SNX11Q9Y5W9 270 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 TRPM6Q9BX84 2022 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 TEX13DA0A0J9YY54 714 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 LRRN3E7EW58 273 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SYT7O43581 403 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 GASTP01350 101 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 CHMP24386 653 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 PRKCDQ05655 676 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 TMEM69Q5SWH9 247 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 PRAMEF17Q5VTA0 474 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 SLC22A10Q63ZE4 541 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 NANOS1Q8WY41 292 aaKnown RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 ACOT13Q9NPJ3 140 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
PARVB-201ENST00000338758 NUP214P35658 2090 aaPredicted RBP13.2□□□□□ -0.3
PARVB-201ENST00000338758 RGS9O75916 674 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 ZNF432O94892 652 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 CXCR4P61073 352 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 TGFBR3Q03167 851 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 THOC7Q6I9Y2 204 aaKnown RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 DLEU7Q6UYE1 221 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ELP5Q8TE02 316 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 NEDD4LQ96PU5 975 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 LHPPQ9H008 270 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 A0A0X1KG70 313 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 PPM1DO15297 605 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SLC6A19Q695T7 634 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 GPR139Q6DWJ6 353 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 TP53I13Q8NBR0 393 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 CDC6Q99741 560 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 TMEM38AQ9H6F2 299 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 TMEM9BQ9NQ34 198 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 SUSD5O60279 629 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 C21orf33P30042 268 aaPredicted RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 PSMB10P40306 273 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 CCL11P51671 97 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 BTG2P78543 158 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SMN1Q16637 294 aaKnown RBP13.19□□□□□ -0.3
PARVB-201ENST00000338758 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 ZNF554Q86TJ5 538 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 CDH24Q86UP0 819 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 SLC22A16Q86VW1 577 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 LILRA2Q8N149 483 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 TNFRSF13CQ96RJ3 184 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
PARVB-201ENST00000338758 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms