RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 AP3S2P59780 193 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MLC1Q15049 377 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF658BQ4V348 819 aaPredicted RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF311Q5JNZ3 666 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 C22orf39Q6P5X5 142 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 Q6ZNB5 142 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MBOAT2Q6ZWT7 520 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 FAM129CQ86XR2 697 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 GJD3Q8N144 294 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 OR9A1PQ8NGU1 263 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF671Q8TAW3 534 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 BRIX1Q8TDN6 353 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 TMEM255BQ8WV15 326 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ASB12Q8WXK4 309 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ZG16BQ96DA0 208 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 SLC25A38Q96DW6 304 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 DERL3Q96Q80 235 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MFRPQ9BY79 579 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MLXQ9UH92 298 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ERVK-19Q9WJR5 959 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 KCNE3Q9Y6H6 103 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 DUSP11O75319 330 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 KHDRBS3O75525 346 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 APOC1P02654 83 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 FXYD6P3P58550 94 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 TRAM1L1Q8N609 369 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 CAMKVQ8NCB2 501 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 OR10K1Q8NGX5 313 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF707Q96C28 371 aaPredicted RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 AMDHD1Q96NU7 426 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 GINS4Q9BRT9 223 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MS4A8Q9BY19 250 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 CPEB1Q9BZB8 566 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 ANKRD10Q9NXR5 420 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 CTSFQ9UBX1 484 aa11.85□□□□□ -0.51
CCDC60-201ENST00000327554 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
CCDC60-201ENST00000327554 H7C4K7 107 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 FGBP02675 491 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 CD96P40200 585 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 RAB13P51153 203 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PRKAG1P54619 331 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SPOUT1Q5T280 376 aaKnown RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 DCAF12L2Q5VW00 463 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 TMEM220Q6QAJ8 160 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SLC36A1Q7Z2H8 476 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 GDF7Q7Z4P5 450 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 RNF180Q86T96 592 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 TMEM173Q86WV6 379 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 EID2Q8N6I1 236 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF764Q96H86 408 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 ENKD1Q9H0I2 346 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 ZNF768Q9H5H4 540 aaKnown RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 RASL12Q9NYN1 266 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 UCHL1P09936 223 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 AKR1A1P14550 325 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 IL9P15248 144 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 MAPK3P27361 379 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 DCTDP32321 178 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PYCR1P32322 319 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PTH2RP49190 550 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SLC11A1P49279 550 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SERTAD2Q14140 314 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 LASP1Q14847 261 aaKnown RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 C18orf63Q68DL7 685 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SSX6Q7RTT6 188 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 OVCH1Q7RTY7 1134 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 TEAD3Q99594 435 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 ZCCHC2Q9C0B9 1178 aaKnown RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 OR52D1Q9H346 318 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 NFKBIL1Q9UBC1 381 aaPredicted RBP11.84□□□□□ -0.51
CCDC60-201ENST00000327554 OBSL1O75147 1896 aa11.84□□□□□ -0.51
CCDC60-201ENST00000327554 F5H5P2 479 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 BHLHE40O14503 412 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 ZNF254O75437 659 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 SBK2P0C263 348 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 PTHLHP12272 177 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 RPA2P15927 270 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 FUT1P19526 365 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 RPS11P62280 158 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM115Q12893 351 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 FGL2Q14314 439 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 ZNF528Q3MIS6 628 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 SERPINA12Q8IW75 414 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 AMER3Q8N944 861 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 FCAMRQ8WWV6 532 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 C16orf58Q96GQ5 468 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 GFI1Q99684 422 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms