RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 A0A0A6YYJ9 748 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TRBV2A0A0J9YWF9 115 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ANKRD61A6NGH8 418 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 SGK494L7N484 410 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 IFNA16P05015 189 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TRAPPC2P0DI81 140 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TRAPPC2BP0DI82 140 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ERGP11308 486 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 C5AR1P21730 350 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 CLDN20P56880 219 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 POU6F2P78424 691 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 DGCR2P98153 550 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 HYAL4Q2M3T9 481 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 NDUFAF6Q330K2 333 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 NR2C2APQ86WQ0 139 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ZFAND1Q8TCF1 268 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ABHD1Q96SE0 405 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TMEM74BQ9NUR3 256 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 CLDND1Q9NY35 253 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 PRSS38A1L453 326 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 BLOC1S5-TXNDC5H3BN57 136 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 FGF17O60258 216 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 HPGDP15428 266 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ARPC4P59998 168 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 RPS15AP62244 130 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 PPP2CBP62714 309 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 PPP2CAP67775 309 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 YIF1BQ5BJH7 314 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 EOGTQ5NDL2 527 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 PRR23CQ6ZRP0 262 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF619Q8N2I2 560 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 OR5M3Q8NGP4 307 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 OR1E3Q8WZA6 343 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 OR14A2Q96R54 314 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TIMM29Q9BSF4 260 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 KCMF1Q9P0J7 381 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ADAM18Q9Y3Q7 739 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 IER3IP1Q9Y5U9 82 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ARID1AO14497 2285 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SCO2O43819 266 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 AGR2O95994 175 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 DBIP07108 87 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZGLP1P0C6A0 271 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HK1P19367 917 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HLA-DMAP28067 261 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HTR2AP28223 471 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ERV3-1Q14264 604 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNHIT3Q15649 155 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 MRM1Q6IN84 353 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 OOSP2Q86WS3 158 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 IL17RCQ8NAC3 791 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 OR4D9Q8NGE8 314 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 GON7Q9BXV9 100 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ASB6Q9NWX5 421 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 IKZF2Q9UKS7 526 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 CES1P1Q9UKY3 287 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 TMEM5Q9Y2B1 443 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF106Q9H2Y7 1883 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ALPK3Q96L96 1907 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 I3L521 148 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 CTSVO60911 334 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC43A1O75387 559 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 RDH16O75452 317 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ADH1BP00325 375 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 C1QBP02746 253 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SBK2P0C263 348 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HOXB2P14652 356 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 GBX2P52951 348 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 C1orf61Q13536 156 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZIC1Q15915 447 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SIAH3Q8IW03 269 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ACOT12Q8WYK0 555 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HERVK_113Q902F9 699 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 NR4A3Q92570 626 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SIPA1Q96FS4 1042 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF681Q96N22 645 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 KLHL21Q9UJP4 597 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 GDI2P50395 445 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 AGFG1P52594 562 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ZAR1Q86SH2 424 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SFTPA2Q8IWL1 248 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 THAP4Q8WY91 577 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 RPP25Q9BUL9 199 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 MCOLN1Q9GZU1 580 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC23A1Q9UHI7 598 aa11.94□□□□□ -0.5
HMGCS1-201ENST00000325110 ARHGEF17Q96PE2 2063 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 MTNR1BP49286 362 aa11.93□□□□□ -0.5
HMGCS1-201ENST00000325110 SLC25A30Q5SVS4 291 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms