RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PCDH15Q96QU1 1955 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 FAM86C2PA6NEL3 165 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SERINC4A6NH21 518 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CTDSP2O14595 271 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GIMD1P0DJR0 217 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 HPGDP15428 266 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CSF2RBP32927 897 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SLC9A3P48764 834 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CSTF1Q05048 431 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 TMEM44Q2T9K0 475 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 C1orf189Q5VU69 101 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 C22orf42Q6IC83 251 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ULK3Q6PHR2 472 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 KIRREL2Q6UWL6 708 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GDPGP1Q6ZNW5 385 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TMEM151BQ8IW70 566 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 OR4C6Q8NH72 309 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 NDC1Q9BTX1 674 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 DUSP15Q9H1R2 295 aaPredicted RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 OR51V1Q9H2C8 321 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ABCB10Q9NRK6 738 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TNFRSF10DQ9UBN6 386 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 UNC13CQ8NB66 2214 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 RGS5O15539 181 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 HCN1O60741 890 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 LALBAP00709 142 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 CLPSP04118 112 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 GUSBP08236 651 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 TGM4P49221 684 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 CTBP2P56545 445 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 SLC37A1P57057 533 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 COPZ1P61923 177 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.29
IFT88-201ENST00000319980 ZP2Q05996 745 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 DNASE1L3Q13609 305 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 ZNF791Q3KP31 576 aaPredicted RBP6.96□□□□□ -1.29
IFT88-201ENST00000319980 RPL13AP3Q6NVV1 102 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 RTL4Q6ZR62 310 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 SIRT6Q8N6T7 355 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 CYB561A3Q8NBI2 242 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 PTP4A1Q93096 173 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 DPYSL5Q9BPU6 564 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 NUDT22Q9BRQ3 303 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 PELOQ9BRX2 385 aaKnown RBP6.96□□□□□ -1.29
IFT88-201ENST00000319980 ZNF426Q9BUY5 554 aa6.96□□□□□ -1.29
IFT88-201ENST00000319980 NXF5Q9H1B4 397 aaKnown RBP6.96□□□□□ -1.29
IFT88-201ENST00000319980 TXNL4BQ9NX01 149 aaKnown RBP6.96□□□□□ -1.29
IFT88-201ENST00000319980 CDC14CA4D256 554 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PRR33A8MZF0 331 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 LRRN3E7EW58 273 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PRR23D1E9PI22 279 aaPredicted RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 ZNF670-ZNF695F2Z2N8 137 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 POLR1CO15160 346 aaPredicted RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 TBX1O43435 398 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 DYRK3O43781 588 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PTP4A3O75365 173 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PPP1R3DO95685 299 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PRR23D2P0DMB1 279 aaPredicted RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 CLUP10909 449 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 CELP19835 753 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 ARRB1P49407 418 aaPredicted RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 CCR4P51679 360 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PSMD4P55036 377 aaKnown RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 RPS25P62851 125 aaKnown RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 GPLD1P80108 840 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 NSDHLQ15738 373 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 D2HGDHQ8N465 521 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 PARP16Q8N5Y8 322 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 LRRC17Q8N6Y2 441 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 ZSCAN1Q8NBB4 408 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 SLC37A3Q8NCC5 494 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 UFD1Q92890 307 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 MVB12AQ96EY5 273 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 GAL3ST4Q96RP7 486 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 TBX5Q99593 518 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 ELF4Q99607 663 aaPredicted RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 BARHL1Q9BZE3 327 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 LRRN3Q9H3W5 708 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 EVA1AQ9H8M9 152 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 ZNF304Q9HCX3 659 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 POLE4Q9NR33 117 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 CMC2Q9NRP2 79 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 FGF21Q9NSA1 209 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 ERVK13-1Q9NX77 482 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 SERTAD3Q9UJW9 196 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 EXOGQ9Y2C4 368 aaKnown RBP6.96□□□□□ -1.3
IFT88-201ENST00000319980 PEX16Q9Y5Y5 336 aa6.96□□□□□ -1.3
IFT88-201ENST00000319980 C12orf71A8MTZ7 269 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SLC30A4O14863 429 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 REM1O75628 298 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CDRT1O95170 752 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 GYPBP06028 91 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CD40LGP29965 261 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RBM34P42696 430 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 DHPSP49366 369 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 RORCP51449 518 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms