RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 TMEM102Q8N9M5 508 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 LUMP51884 338 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 VSX1Q9NZR4 365 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 UNKLQ9H9P5 680 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 PCDHGA6Q9Y5G7 932 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 LIPCP11150 499 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CAV3P56539 151 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 RBM39Q14498 530 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 WBP2NLQ6ICG8 309 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 DNAJC22Q8N4W6 341 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 OR5D14Q8NGL3 314 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 SLC2A12Q8TD20 617 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 POLHQ9Y253 713 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 HEMK1Q9Y5R4 338 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 TFAP2AP05549 437 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 POLR2IP36954 125 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 PSPHP78330 225 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 ABHD12BQ7Z5M8 362 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 TOE1Q96GM8 510 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CNTNAP3BQ96NU0 1288 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 INSM2Q96T92 566 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 C7orf50Q9BRJ6 194 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 NOX3Q9HBY0 568 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 PLEK2Q9NYT0 353 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 NWD2Q9ULI1 1742 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 H0YIV9 168 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 GPR75O95800 540 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 GAAP10253 952 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 HOXC13P31276 330 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CTHP32929 405 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 CHRNEQ04844 493 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 MRPL2Q5T653 305 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 RHOXF1Q8NHV9 184 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 NXF5Q9H1B4 397 aaKnown RBP13.04□□□□□ -0.32
PRKCB-201ENST00000303531 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
PRKCB-201ENST00000303531 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ZNF28P17035 718 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 IMPA1P29218 277 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 PXNP49023 591 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ABHD17BQ5VST6 288 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 AGAP6Q5VW22 663 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 AGAP4Q96P64 663 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 DVL2O14641 736 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 NUDT21O43809 227 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MAOAP21397 527 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 KCNJ10P78508 379 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MRPL21Q7Z2W9 205 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 PRRT1Q99946 306 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 FAM230AA0A1W2PPH8 454 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 OPN1LWP04000 364 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 GABRR1P24046 479 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TSPAN31Q12999 210 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ERV3-1Q14264 604 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 SIMC1Q8NDZ2 872 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 IL17RDQ8NFM7 739 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 OR13C2Q8NGS9 318 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 OR9A4Q8NGU2 314 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ABRACLQ9P1F3 81 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 KLHL13Q9P2N7 655 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 HHLA2Q9UM44 414 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ADAM18Q9Y3Q7 739 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 CD79AP11912 226 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 PM20D2Q8IYS1 436 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 OR2A12Q8NGT7 310 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 CDC14CA4D256 554 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 HLA-DMAP28067 261 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 RPE65Q16518 533 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TATDN3Q17R31 274 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TESQ9UGI8 421 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 HNRNPFP52597 415 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ADARB1P78563 741 aaKnown RBP13.03□□□□□ -0.32
PRKCB-201ENST00000303531 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 ZNF529Q6P280 563 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 RFLNAQ6ZTI6 216 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 DNAJC5GQ8N7S2 189 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 TM9SF4Q92544 642 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MMP2P08253 660 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 BDKRB2P30411 391 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 FOLR3P41439 243 aa13.03□□□□□ -0.32
PRKCB-201ENST00000303531 MEF2DQ14814 521 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms