RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 OR4N2Q8NGD1 307 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 UBQLN4Q9NRR5 601 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 MEIS3P1A6NDR6 274 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CXCL11O14625 94 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NSG1P42857 185 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SIM1P81133 766 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ZFP41Q8N8Y5 198 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 GPR119Q8TDV5 335 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NMNAT1Q9HAN9 279 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 MYOTQ9UBF9 498 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 COL14A1Q05707 1796 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 MEGF11A6BM72 1044 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 B4GALT4O60513 344 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 OR5AR1Q8NGP9 310 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CABLES2Q9BTV7 478 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 OR10A5Q9H207 317 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 GPR83Q9NYM4 423 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC9B1P1A6NJY1 282 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CA5AP35218 305 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 UFM1P61960 85 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 COL5A1-AS1Q5SY13 56 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 DCLRE1AQ6PJP8 1040 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF440Q8IYI8 595 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 FOXJ1Q92949 421 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NKD2Q969F2 451 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 KCNA7Q96RP8 456 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NOCTQ9UK39 431 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ACTL7AQ9Y615 435 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CD63P08962 238 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 LCLAT1Q6UWP7 414 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 GLB1L2Q8IW92 636 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SEC22CQ9BRL7 303 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 C9J4A7 227 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 HOXB5P09067 269 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A10P0DMU9 189 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM225BP0DP42 221 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 BRCC3P46736 316 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF90Q03938 601 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 LRIT3Q3SXY7 679 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 PDZD7Q9H5P4 517 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CDHR4A6H8M9 788 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 C11orf98E9PRG8 122 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 M0R143 59 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 BMPR1BO00238 502 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 BMPR1AP36894 532 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 NKX3-2P78367 333 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ETFDHQ16134 617 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ADGRF3Q8IZF5 1079 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM120CQ9NX05 1096 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SRPXP78539 464 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 TESK1Q15569 626 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 B3GNT7Q8NFL0 401 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 NICN1Q9BSH3 213 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 POFUT1Q9H488 388 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 KPTNQ9Y664 436 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 J3KR12 359 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CD52P31358 61 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 NDST2P52849 883 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR5W2Q8NH69 310 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ZFP90Q8TF47 636 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CRXO43186 299 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC7A9P82251 487 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC22A6Q4U2R8 563 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CD300LGQ6UXG3 332 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 MAGIXQ9H6Y5 334 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SLAMF7Q9NQ25 335 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 PTGER3P43115 390 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 HCCSP53701 268 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 EMP3P54852 163 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 MS4A15Q8N5U1 240 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 MT-CYBP00156 380 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SPATA31D3P0C874 917 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OC90Q02509 493 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 GPR176Q14439 515 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SPATA31D4Q6ZUB0 917 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR4F5Q8NH21 305 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC22A18Q96BI1 424 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 BTN2A3PQ96KV6 586 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR4F4Q96R69 305 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 EMC7Q9NPA0 242 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ISYNA1Q9NPH2 558 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 DOCK5Q9H7D0 1870 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 ABCC6O95255 1503 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 TRAV18A0A075B6X5 111 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 CNTN5O94779 1100 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 GGT1P19440 569 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 KLHDC8BQ8IXV7 354 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 UBAC2Q8NBM4 344 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 DTD1Q8TEA8 209 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 HMCESQ96FZ2 354 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 KCNK13Q9HB14 408 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms