RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 A0A087WUJ7 227 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 EIF4E2O60573 245 aaKnown RBP20.89■□□□□ 0.93
PTX3-201ENST00000295927 IGHEP01854 428 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 NAGAP17050 411 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 ENDOUP21128 410 aaKnown RBP20.89■□□□□ 0.93
PTX3-201ENST00000295927 RPS18P62269 152 aaKnown RBP20.89■□□□□ 0.93
PTX3-201ENST00000295927 NEDD8Q15843 81 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 EXT1Q16394 746 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 CLEC12AQ5QGZ9 265 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 CLDN22Q8N7P3 220 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 TCEANCQ8N8B7 351 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 OR11G2Q8NGC1 345 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 TSSK6Q9BXA6 273 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 CLN6Q9NWW5 311 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 TCFL5Q9UL49 500 aa20.89■□□□□ 0.93
PTX3-201ENST00000295927 EP300Q09472 2414 aaPredicted RBP20.88■□□□□ 0.93
PTX3-201ENST00000295927 SOCS6O14544 535 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 CELA2AP08217 269 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 RAB40ALP0C0E4 278 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 NBL1P41271 181 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 SLC6A8P48029 635 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 OR8J1Q8NGP2 316 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 IPCEF1Q8WWN9 437 aaPredicted RBP20.88■□□□□ 0.93
PTX3-201ENST00000295927 HGDQ93099 445 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 ZNF524Q96C55 264 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 PSORS1C1Q9UIG5 152 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 CFAP54Q96N23 3096 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 ADAM10O14672 748 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 PRKYO43930 277 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 GMFGO60234 142 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 OR2J2O76002 312 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 CDK4P11802 303 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 PCYT1AP49585 367 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 PMS2P3Q13401 168 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 PLAG1Q6DJT9 500 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 XAF1Q6GPH4 301 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 AHSA2Q719I0 299 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 MRGPREQ86SM8 312 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 SAMD8Q96LT4 415 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 POLDIP3Q9BY77 421 aaKnown RBP20.88■□□□□ 0.93
PTX3-201ENST00000295927 CCNB1IP1Q9NPC3 277 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 ICAM5Q9UMF0 924 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 FARSAQ9Y285 508 aaKnown RBP20.88■□□□□ 0.93
PTX3-201ENST00000295927 PCNX3Q9H6A9 2034 aa20.88■□□□□ 0.93
PTX3-201ENST00000295927 SH3D21A4FU49 640 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 EFCAB9A8MZ26 197 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 SAGP10523 405 aaPredicted RBP20.87■□□□□ 0.93
PTX3-201ENST00000295927 MST1P26927 711 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 CRYZQ08257 329 aaKnown RBP20.87■□□□□ 0.93
PTX3-201ENST00000295927 LYPD8Q6UX82 237 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 OR4Q3Q8NH05 313 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 ZNF563Q8TA94 476 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 M1APQ8TC57 530 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 SLC22A8Q8TCC7 542 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 GGHQ92820 318 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 TMCO6Q96DC7 493 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 RBM38Q9H0Z9 239 aaKnown RBP20.87■□□□□ 0.93
PTX3-201ENST00000295927 VCX3AQ9NNX9 186 aa20.87■□□□□ 0.93
PTX3-201ENST00000295927 A0A1W2PQ72 361 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 ENO4A6NNW6 628 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 RGS10O43665 173 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 JUNBP17275 347 aaPredicted RBP20.86■□□□□ 0.93
PTX3-201ENST00000295927 ITPKBP27987 946 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 FXYD6P3P58550 94 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 EFNB1P98172 346 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 SNAPC1Q16533 368 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 TMEM201Q5SNT2 666 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 SLC30A6Q6NXT4 461 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 NDUFAF7Q7L592 441 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 NUP54Q7Z3B4 507 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 ATG4DQ86TL0 474 aaPredicted RBP20.86■□□□□ 0.93
PTX3-201ENST00000295927 OR13C2Q8NGS9 318 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 FANK1Q8TC84 345 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 BRIX1Q8TDN6 353 aaKnown RBP20.86■□□□□ 0.93
PTX3-201ENST00000295927 CCNL2Q96S94 520 aaPredicted RBP20.86■□□□□ 0.93
PTX3-201ENST00000295927 OR52D1Q9H346 318 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 MMP25Q9NPA2 562 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 FKBP14Q9NWM8 211 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 IL20RAQ9UHF4 553 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 KNTC1P50748 2209 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 NSG1A0A0A6YYJ2 146 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 CLCA1A8K7I4 914 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 TLX2O43763 284 aaPredicted RBP20.86■□□□□ 0.93
PTX3-201ENST00000295927 ENTPD6O75354 484 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 PNMTP11086 282 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 PPP1R32Q7Z5V6 425 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 GPR141Q7Z602 305 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 OR5W2Q8NH69 310 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 DUSP19Q8WTR2 217 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 SIGLEC11Q96RL6 698 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 COPS4Q9BT78 406 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 DNAJC27Q9NZQ0 273 aa20.86■□□□□ 0.93
PTX3-201ENST00000295927 ELOA3DA6NLF2 546 aaPredicted RBP20.85■□□□□ 0.93
PTX3-201ENST00000295927 H3BSA7 217 aa20.85■□□□□ 0.93
PTX3-201ENST00000295927 FOXD2O60548 495 aaPredicted RBP20.85■□□□□ 0.93
PTX3-201ENST00000295927 DKK1O94907 266 aa20.85■□□□□ 0.93
PTX3-201ENST00000295927 MT-ND2P03891 347 aa20.85■□□□□ 0.93
PTX3-201ENST00000295927 PCMT1P22061 227 aa20.85■□□□□ 0.93
PTX3-201ENST00000295927 OTX2P32243 289 aa20.85■□□□□ 0.93
PTX3-201ENST00000295927 SLC1A3P43003 542 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms