RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 SFXN5Q8TD22 340 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 ST8SIA1Q92185 356 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-201ENST00000267935 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 CXorf36Q9H7Y0 433 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 COQ10BQ9H8M1 238 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-201ENST00000267935 PRSS50Q9UI38 385 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 CDC42EP3Q9UKI2 254 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 B3GALT5Q9Y2C3 310 aa12.58□□□□□ -0.4
COMMD4-201ENST00000267935 NPIPA5A0A0B4J1W7 369 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SERINC4A6NH21 518 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 CCT8L1PA6NM43 557 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SHISA9B4DS77 424 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 C9JVG2 144 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 NPIPA7E9PJI5 369 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SULT2B1O00204 365 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 GPR171O14626 319 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 RAMP1O60894 148 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PEX11AO75192 247 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 STX11O75558 287 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 CYP7B1O75881 506 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 THBS1P07996 1170 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 DHRS4L1P0CG22 281 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 NPIPA8P0DM63 369 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 LAMP1P11279 417 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PGCP20142 388 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PRPS1L1P21108 318 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PDK3Q15120 406 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 TIGD2Q4W5G0 525 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SLC22A25Q6T423 547 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 DNM1P46Q6ZS02 220 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 TMPPEQ6ZT21 453 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PSMA8Q8TAA3 256 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 TWIST2Q8WVJ9 160 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 COQ8BQ96D53 544 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 SDF2Q99470 211 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 DHRS9Q9BPW9 319 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 KLHDC3Q9BQ90 382 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 THUMPD3Q9BV44 507 aaKnown RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 TUBB1Q9H4B7 451 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 CBLN4Q9NTU7 201 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 NOSIPQ9Y314 301 aaKnown RBP12.57□□□□□ -0.4
COMMD4-201ENST00000267935 FBN3Q75N90 2809 aa12.57□□□□□ -0.4
COMMD4-201ENST00000267935 FAM234BA2RU67 622 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 ANKRD28O15084 1053 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 OIP5O43482 229 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 NPHS1O60500 1241 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 NDUFS7O75251 213 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 C6orf47O95873 294 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 AGR2O95994 175 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 FAM153BP0C7A2 387 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 FAM157CP0CG43 387 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 TFPIP10646 304 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 SLC25A16P16260 332 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 MATN1P21941 496 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 TTKP33981 857 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 APOBEC1P41238 236 aaKnown RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 DIO1P49895 249 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 FABP6P51161 128 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 CHRNB3Q05901 458 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 MERTKQ12866 999 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 FAM153CQ494X1 144 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 OR7E24Q6IFN5 339 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 EIF3MQ7L2H7 374 aaKnown RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 APH1AQ96BI3 265 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 OR7D2Q96RA2 312 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 TNFRSF13CQ96RJ3 184 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 BEX2Q9BXY8 128 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 TXLNGYQ9BZA5 131 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 BHLHE41Q9C0J9 482 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 EXD2Q9NVH0 621 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 GPATCH2Q9NW75 528 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
COMMD4-201ENST00000267935 NUP214P35658 2090 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-201ENST00000267935 SMIM23A6NLE4 172 aa12.55□□□□□ -0.4
COMMD4-201ENST00000267935 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
COMMD4-201ENST00000267935 ETV2O00321 342 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-201ENST00000267935 PIP5K1BO14986 540 aa12.55□□□□□ -0.4
COMMD4-201ENST00000267935 SMAD9O15198 467 aaKnown RBP12.55□□□□□ -0.4
COMMD4-201ENST00000267935 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
COMMD4-201ENST00000267935 CSTAP01040 98 aa12.55□□□□□ -0.4
COMMD4-201ENST00000267935 COX5AP20674 150 aa12.55□□□□□ -0.4
COMMD4-201ENST00000267935 CLK1P49759 484 aaKnown RBP12.55□□□□□ -0.4
COMMD4-201ENST00000267935 RNF144AP50876 292 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-201ENST00000267935 SESN3P58005 492 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms