RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 GID4Q8IVV7 300 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 PLPP6Q8IY26 295 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 OR10G6Q8NH81 332 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 HAVCR2Q8TDQ0 301 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 CXorf40BQ96DE9 158 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 SRA1Q9HD15 236 aaKnown RBP11.49□□□□□ -0.57
USP30-201ENST00000257548 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 OTOFQ9HC10 1997 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 RAB19A4D1S5 217 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 METTL21EPA6NDL7 271 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 UNC119BA6NIH7 251 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 PLPP1O14494 284 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 SLC16A5O15375 505 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 FADS1O60427 444 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 RCBTB2O95199 551 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 CD160O95971 181 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 ANKRD34CP0C6C1 535 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
USP30-201ENST00000257548 MPEG1Q2M385 716 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 OR1F2PQ96R84 312 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 KXD1Q9BQD3 176 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 KCNK6Q9Y257 313 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 MED31Q9Y3C7 131 aa11.49□□□□□ -0.57
USP30-201ENST00000257548 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
USP30-201ENST00000257548 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GRXCR1A8MXD5 290 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 H3BNC9 293 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GFYI3L273 518 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 M0R036 132 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 EOMESO95936 686 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 ATF1P18846 271 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 TAS2R38P59533 333 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 KRBOX4Q5JUW0 171 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 CD300LGQ6UXG3 332 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 CMIPQ8IY22 773 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 THEM6Q8WUY1 208 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FN3KQ9H479 309 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 WDR90Q96KV7 1748 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 CA12O43570 354 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 PRAMEF2O60811 474 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 OR6A2O95222 327 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 C1orf105O95561 183 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GALTP07902 379 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 HMGA2P52926 109 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 ART1P52961 327 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FKBP1BP68106 108 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 RBM39Q14498 530 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 LTB4RQ15722 352 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GJD3Q8N144 294 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 BRIX1Q8TDN6 353 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 NEURL3Q96EH8 262 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GPR137Q96N19 417 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FOXN4Q96NZ1 517 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 LIN7BQ9HAP6 207 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 ZNF304Q9HCX3 659 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 NTMQ9P121 344 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GPR160Q9UJ42 338 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 STON1Q9Y6Q2 735 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 CCL16O15467 120 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FGF9P31371 208 aaPredicted RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 SIM1P81133 766 aaPredicted RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 CAP1Q01518 475 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 FAM74A3Q4VXF1 159 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 MEPCEQ7L2J0 689 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 CMTM4Q8IZR5 234 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 ACOT11Q8WXI4 607 aaPredicted RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 MRPL48Q96GC5 212 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 ADAD1Q96M93 576 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GLIPR2Q9H4G4 154 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 PTTG3PQ9NZH4 202 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GSKIPQ9P0R6 139 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 GLS2Q9UI32 602 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 SIRT4Q9Y6E7 314 aaPredicted RBP11.48□□□□□ -0.57
USP30-201ENST00000257548 KCNE3Q9Y6H6 103 aa11.48□□□□□ -0.57
USP30-201ENST00000257548 D6RAR5 112 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 FZD6O60353 706 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 DOK2O60496 412 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ITGA10O75578 1167 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 SEMG1P04279 462 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ADRB1P08588 477 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 HOXD4P09016 255 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 HLA-FP30511 346 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 AKR1C3P42330 323 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 LINC00303Q3SY05 128 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 CBARPQ8N350 705 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 GTPBP8Q8N3Z3 284 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 C12orf45Q8N5I9 185 aaPredicted RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 PCSK9Q8NBP7 692 aaKnown RBP11.47□□□□□ -0.57
USP30-201ENST00000257548 PXT1Q8NFP0 134 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 OR4Q3Q8NH05 313 aa11.47□□□□□ -0.57
USP30-201ENST00000257548 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms