RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 NIPAL3Q6P499 406 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
VHL-201ENST00000256474 HCAR2Q8TDS4 363 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 OR1E3Q8WZA6 343 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 PTP4A1Q93096 173 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 IL21RQ9HBE5 538 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 CLDND1Q9NY35 253 aa12.52□□□□□ -0.41
VHL-201ENST00000256474 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 STX11O75558 287 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 LINC00271P0C7V0 271 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 PPP1CAP62136 330 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 GPM6BQ13491 265 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 DECR1Q16698 335 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 YIF1BQ5BJH7 314 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 POGLUT1Q8NBL1 392 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
VHL-201ENST00000256474 ARHGDIGQ99819 225 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 IER3IP1Q9Y5U9 82 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 CACNG2Q9Y698 323 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 RFPL3O75679 317 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 CXCL3P19876 107 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 RAB3BP20337 219 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 RAB7BQ96AH8 199 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 CCDC120Q96HB5 630 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 RNF170Q96K19 258 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 DERL3Q96Q80 235 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 HCN3Q9P1Z3 774 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
VHL-201ENST00000256474 OR10H1Q9Y4A9 318 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 TRBV2A0A0J9YWF9 115 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 C4orf47A7E2U8 309 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 CENPBD1B2RD01 187 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 ALX3O95076 343 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
VHL-201ENST00000256474 TFPIP10646 304 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 FGF9P31371 208 aaPredicted RBP12.51□□□□□ -0.41
VHL-201ENST00000256474 VASNQ6EMK4 673 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 GJD3Q8N144 294 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 OR7G1Q8NGA0 311 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 ZNF681Q96N22 645 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 OR2M4Q96R27 311 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 OR10A4Q9H209 315 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 CES1P1Q9UKY3 287 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 TMEM5Q9Y2B1 443 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 PCDHGB7Q9Y5F8 929 aa12.51□□□□□ -0.41
VHL-201ENST00000256474 WDFY4Q6ZS81 3184 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 I3L521 148 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 RDH16O75452 317 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 GATBO75879 557 aaKnown RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 HRGP04196 525 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 ZNF3P17036 446 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 ERVK-21P61565 698 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 RPS21P63220 83 aaKnown RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 STX4Q12846 297 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 TMEM64Q6YI46 380 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 TSSK2Q96PF2 358 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 A8MUA0 341 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 SCO2O43819 266 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 IFNA16P05015 189 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 CT62P0C5K7 136 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 TRA2BP62995 288 aaKnown RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 PRR23CQ6ZRP0 262 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 RFPL4BQ6ZWI9 263 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 ARIH2OSQ8N7S6 290 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 TP53BP1Q12888 1972 aaPredicted RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 ARHGEF17Q96PE2 2063 aaPredicted RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 PRSS38A1L453 326 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 RCBTB2O95199 551 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 CTSBP07858 339 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
VHL-201ENST00000256474 F8A1P23610 371 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 STOMP27105 288 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 PRKAR1BP31321 381 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 CLDN20P56880 219 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 BICRALQ6AI39 1079 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 FIGLAQ6QHK4 219 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 THAP4Q8WY91 577 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 NMNAT3Q96T66 252 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 DPAGT1Q9H3H5 408 aa12.5□□□□□ -0.41
VHL-201ENST00000256474 OR6C2Q9NZP2 312 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms