RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 MEDAGQ5VYS4 303 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 TMEM81Q6P7N7 255 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NLGN4XQ8N0W4 816 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 TMCO5AQ8N6Q1 288 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 OR5W2Q8NH69 310 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 ARSGQ96EG1 525 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 TUBA1CQ9BQE3 449 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 MED17Q9NVC6 651 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 SNX5Q9Y5X3 404 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 WWP2O00308 870 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 HCRTR2O43614 444 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 HPP00738 406 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 GPR4P46093 362 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NTRK2Q16620 822 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 OCLNQ16625 522 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 TMEM236Q5W0B7 351 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CBLN3Q6UW01 205 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 LYPD8Q6UX82 237 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 PRSS48Q7RTY5 328 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 TMPRSS12Q86WS5 348 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CCDC103Q8IW40 242 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 GATSQ8NAP1 163 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 ZNF540Q8NDQ6 660 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NLGN4YQ8NFZ3 816 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 OR52L1Q8NGH7 329 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 SLC38A2Q96QD8 506 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NODALQ96S42 347 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 DPH1Q9BZG8 443 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 ADAM19Q9H013 955 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 EGLN3Q9H6Z9 239 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 ZBTB20Q9HC78 741 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 TBC1D23Q9NUY8 699 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 CDC42EP2O14613 210 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 OIP5O43482 229 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 HCN1O60741 890 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 HMGN1P05114 100 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 PIPP12273 146 aaPredicted RBP12.97□□□□□ -0.33
SDF2-201ENST00000247020 PCYT1AP49585 367 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 CCR4P51679 360 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 CLDN6P56747 220 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 EFNB1P98172 346 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 MVKQ03426 396 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 C17orf67Q0P5P2 114 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 TMEM44Q2T9K0 475 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 MARCH3Q86UD3 253 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 SPARTQ8N0X7 666 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 SVOPQ8N4V2 548 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 FAM26EQ8N5C1 309 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 OR2T33Q8NG76 320 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 B4GALNT2Q8NHY0 566 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 ZNF563Q8TA94 476 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 MYDGFQ969H8 173 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 UBE2FQ969M7 185 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 SPACA9Q96E40 222 aaPredicted RBP12.97□□□□□ -0.33
SDF2-201ENST00000247020 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 RASL10BQ96S79 203 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 SECISBP2Q96T21 854 aaKnown RBP12.97□□□□□ -0.33
SDF2-201ENST00000247020 OR52D1Q9H346 318 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 DSN1Q9H410 356 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 LIN28AQ9H9Z2 209 aaKnown RBP12.97□□□□□ -0.33
SDF2-201ENST00000247020 SDHAF3Q9NRP4 125 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 C20orf141Q9NUB4 165 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 FOXJ2Q9P0K8 574 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 PSORS1C1Q9UIG5 152 aa12.97□□□□□ -0.33
SDF2-201ENST00000247020 YARS2Q9Y2Z4 477 aaKnown RBP12.97□□□□□ -0.33
SDF2-201ENST00000247020 PMS2P1A4D2B8 440 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ELOA3DA6NLF2 546 aaPredicted RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 EFCAB9A8MZ26 197 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ADAM10O14672 748 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 TP53I11O14683 189 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 TERTO14746 1132 aaKnown RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 RGS10O43665 173 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 NTN1O95631 604 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 IGFBP1P08833 259 aaPredicted RBP12.96□□□□□ -0.33
SDF2-201ENST00000247020 HTR1AP08908 422 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 BMP7P18075 431 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 MAKP20794 623 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 MSX1P28360 303 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 GRK5P34947 590 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 HTR3AP46098 478 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 DLX5P56178 289 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 FBXW4P57775 412 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 CHAF1BQ13112 559 aa12.96□□□□□ -0.33
SDF2-201ENST00000247020 DNASE1L3Q13609 305 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms