RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CRYZQ08257 329 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 LIPKQ5VXJ0 399 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 PLBD1Q6P4A8 553 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 APOOLQ6UXV4 268 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 OAFQ86UD1 273 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 TMCO5AQ8N6Q1 288 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF485Q8NCK3 441 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 TM9SF4Q92544 642 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 PIGKQ92643 395 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 TNFRSF13CQ96RJ3 184 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF649Q9BS31 505 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 IFT27Q9BW83 186 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 WDR12Q9GZL7 423 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 NXF2Q9GZY0 626 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 MMP27Q9H306 513 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 MKKSQ9NPJ1 570 aaPredicted RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 SLC22A11Q9NSA0 550 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CHCHD3Q9NX63 227 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CCDC59Q9P031 241 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 H2AFY2Q9P0M6 372 aaPredicted RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 MKL2Q9ULH7 1088 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CPEP16870 476 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CCL7P80098 99 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF362Q5T0B9 420 aaPredicted RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 COX15Q7KZN9 410 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 SLITRK4Q8IW52 837 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 C9orf40Q8IXQ3 194 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 AMER2Q8N7J2 671 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 GATSQ8NAP1 163 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 C7orf57Q8NEG2 295 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 OIT3Q8WWZ8 545 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 TRMT61AQ96FX7 289 aaKnown RBP16.97■□□□□ 0.31
HOXC11-201ENST00000243082 MCCC2Q9HCC0 563 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CMC2Q9NRP2 79 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 CTSFQ9UBX1 484 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 SEC14L4Q9UDX3 406 aa16.97■□□□□ 0.31
HOXC11-201ENST00000243082 HEATR5AQ86XA9 2040 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 A0A087WUJ7 227 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 GNB5O14775 395 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 OIP5O43482 229 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 UTS2O95399 124 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 PSMA1P25786 263 aaKnown RBP16.96■□□□□ 0.31
HOXC11-201ENST00000243082 CD79BP40259 229 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 SLC1A3P43003 542 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 GPR143P51810 404 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 EBPQ15125 230 aaKnown RBP16.96■□□□□ 0.31
HOXC11-201ENST00000243082 RHBDD2Q6NTF9 364 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 GDPGP1Q6ZNW5 385 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 LHFPL3Q86UP9 236 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF440Q8IYI8 595 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 MAML2Q8IZL2 1156 aaPredicted RBP16.96■□□□□ 0.31
HOXC11-201ENST00000243082 ZNF527Q8NB42 609 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 OR14A16Q8NHC5 309 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 DNAJA4Q8WW22 397 aaPredicted RBP16.96■□□□□ 0.31
HOXC11-201ENST00000243082 GATAD2BQ8WXI9 593 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 DAZLQ92904 295 aaKnown RBP16.96■□□□□ 0.31
HOXC11-201ENST00000243082 C3orf49Q96BT1 292 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 HCAR1Q9BXC0 346 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 MED20Q9H944 212 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 ICAM5Q9UMF0 924 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 A3GALT2U3KPV4 340 aa16.96■□□□□ 0.31
HOXC11-201ENST00000243082 C2orf92A0A1B0GVN3 265 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 IGHA1P01876 353 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 ANKRD34CP0C6C1 535 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 NIPAL3Q6P499 406 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 RTL4Q6ZR62 310 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 GID4Q8IVV7 300 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 EDAQ92838 391 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 PTP4A1Q93096 173 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 OTULINQ96BN8 352 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 GAL3ST4Q96RP7 486 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 NRSN2Q9GZP1 204 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 ISYNA1Q9NPH2 558 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 STUB1Q9UNE7 303 aa16.96■□□□□ 0.3
HOXC11-201ENST00000243082 FAM86C2PA6NEL3 165 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 J3QRE1 110 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 HPGDP15428 266 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 COPZ1P61923 177 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 DCAF7P61962 342 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 SKP2Q13309 424 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 INAQ16352 499 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 DESI1Q6ICB0 168 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 CBLN3Q6UW01 205 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 B3GLCTQ6Y288 498 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 MEPCEQ7L2J0 689 aaKnown RBP16.95■□□□□ 0.3
HOXC11-201ENST00000243082 PRR22Q8IZ63 422 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 FAM181AQ8N9Y4 354 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 SLC38A9Q8NBW4 561 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 PLPP5Q8NEB5 264 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 ADOQ96SZ5 270 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 ARHGAP9Q9BRR9 750 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 EXOSC4Q9NPD3 245 aaKnown RBP16.95■□□□□ 0.3
HOXC11-201ENST00000243082 SRPK3Q9UPE1 567 aa16.95■□□□□ 0.3
HOXC11-201ENST00000243082 SPIN1Q9Y657 262 aaPredicted RBP16.95■□□□□ 0.3
HOXC11-201ENST00000243082 SCDO00767 359 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 LAMTOR5O43504 91 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 UBL4AP11441 157 aa16.94■□□□□ 0.3
HOXC11-201ENST00000243082 FOXL2P58012 376 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 278.3 ms