RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 BRIX1Q8TDN6 353 aaKnown RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 SUSD6Q92537 303 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 DERL3Q96Q80 235 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 TNFRSF13CQ96RJ3 184 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 FN3KQ9H479 309 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 METTL17Q9H7H0 456 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 ZNF224Q9NZL3 707 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 VCANP13611 3396 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 A0A087WV48 116 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 TRAPPC13A5PLN9 417 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 SPTBP11277 2137 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 EEF1A1P68104 462 aaKnown RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 BDH1Q02338 343 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 SNTA1Q13424 505 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 IRF4Q15306 451 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 DEFB134Q4QY38 66 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 CD276Q5ZPR3 534 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 HEPHL1Q6MZM0 1159 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 KANSL1Q7Z3B3 1105 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 NRROSQ86YC3 692 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 LNX2Q8N448 690 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 RAB42Q8N4Z0 105 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 ZNF614Q8N883 585 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 WFIKKN2Q8TEU8 576 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 C10orf90Q96M02 699 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 RBP7Q96R05 134 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 OR2M2Q96R28 347 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 PDCD1LG2Q9BQ51 273 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 JAM3Q9BX67 310 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 ADH1CP00326 375 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 CLTBP09497 229 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 GALP22466 123 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 NDUFS1P28331 727 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 DRD3P35462 400 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 CLDN12P56749 244 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 GAB4Q2WGN9 574 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 FAAP20Q6NZ36 180 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 PXKQ7Z7A4 578 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 TTLQ8NG68 377 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 OR2L8Q8NGY9 312 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 OTUB2Q96DC9 234 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 OR14A2Q96R54 314 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 PITHD1Q9GZP4 211 aaPredicted RBP12.98□□□□□ -0.33
USH1C-201ENST00000005226 WDR26Q9H7D7 661 aa12.98□□□□□ -0.33
USH1C-201ENST00000005226 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 FAM86C2PA6NEL3 165 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 EPXP11678 715 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 NOGQ13253 232 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SUZ12Q15022 739 aaKnown RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 HES5Q5TA89 166 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 NLRC3Q7RTR2 1065 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ZAR1Q86SH2 424 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ZNF671Q8TAW3 534 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ADAMTS14Q8WXS8 1223 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 NR4A3Q92570 626 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 PTCHD1Q96NR3 888 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ZNF559Q9BR84 538 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SLC25A18Q9H1K4 315 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 CMC2Q9NRP2 79 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 TP53BP1Q12888 1972 aaPredicted RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 MEIKINA0A087WXM9 373 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 IDSB3KWA1 339 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LDB3O75112 727 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 OR7A10O76100 309 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LYPD3O95274 346 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 TFP02787 698 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LAMP2P13473 410 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SHC2P98077 582 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 STPG1Q5TH74 334 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 GPR139Q6DWJ6 353 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 DMKNQ6E0U4 476 aaPredicted RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 IDO2Q6ZQW0 420 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 VN1R4Q7Z5H5 301 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LRRC25Q8N386 305 aaPredicted RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SPERTQ8NA61 448 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LGALS14Q8TCE9 139 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 GPR174Q9BXC1 333 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 IL21RQ9HBE5 538 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SIGLEC7Q9Y286 467 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 ANKRD61A6NGH8 418 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LRRN3E7EW58 273 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 G3V3Q6 166 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 PRICKLE3O43900 615 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms