RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cdkl3Q8BLF2 595 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tram1l1Q8QZR0 363 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tsen15Q8R3W5 168 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr272Q8VGA0 319 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rpe65Q91ZQ5 533 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ferd3lQ923Z4 168 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 1700029P11RikQ9CQ68 150 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Dimt1Q9D0D4 313 aaKnown RBP10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mcemp1Q9D8U6 183 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Sgk3Q9ERE3 496 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Plscr3Q9JIZ9 296 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Asic5Q9R0Y1 495 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 NcdnQ9Z0E0 729 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Il17dA0A0B4J1G4 205 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zfp978A2A7I1 335 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cd300cA2A7V7 229 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm595A2AF73 655 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 I0C0044D17RikA6PWL3 169 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Dbx2F8VQH7 377 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zfp141G3UY09 685 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tmem200cJ3QK46 637 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 H2-Q7P14429 334 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 H2-Q9P14431 200 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 SptbP15508 2128 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Nat2P50295 290 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cdh11P55288 796 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rnf223Q3UV31 285 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 TefmQ5SSK3 364 aaKnown RBP10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Snap91Q61548 901 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Vat1Q62465 406 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pcp4l1Q6W8Q3 68 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Marveld1Q7TQJ1 173 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Slc5a8Q8BYF6 611 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pramef8Q8CE24 480 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Laptm4bQ91XQ6 227 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ndufa5Q9CPP6 116 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tas2r103Q9JKA3 312 aa10.8□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rev3lQ61493 3122 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Bdp1Q571C7 2467 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Rpl7a-ps5A0A140T8L3 268 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm5475D3YV11 175 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Enthd1E9Q1Z2 618 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Vmn2r105E9Q3A5 860 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zbtb25G3UW50 439 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 PdynO35417 248 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Chrnb1P09690 501 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gdi1P50396 447 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Bglap3P54615 95 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cd38P56528 304 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Map3k8Q07174 467 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tamm41Q3TUH1 337 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Apcdd1Q3U128 514 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Opa3Q505D7 179 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Prg2Q61878 223 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Nsg1Q62092 185 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 HepacamQ640R3 418 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Eid2Q6X7S9 236 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr1231Q7TQZ8 313 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Aldh3b1Q80VQ0 468 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Sgpp2Q810K3 354 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 MkxQ8BIA3 353 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cd99l2Q8BIF0 237 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cables2Q8K3M5 476 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tor2aQ8R1J9 321 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr63Q8VBW9 316 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mrpl43Q99N89 183 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Wdr45bQ9CR39 344 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pnp2Q9D8C9 305 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Bco1Q9JJS6 566 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Ndrg3Q9QYF9 375 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Exo1Q9QZ11 837 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Stub1Q9WUD1 304 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 PtprsB0V2N1 1907 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Crybg1A0A0G2JG52 2065 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cacna1eQ61290 2272 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Zfp433A0A0J9YUD4 600 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gm32687A0A1W2P6H7 600 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr1076A2AK60 313 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Cldn34aG3UW52 211 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 F10O88947 481 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Fabp1P12710 127 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tgfb3P17125 410 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Hoxd9P28357 339 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 VipP32648 170 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Olfr6P34986 316 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Fxyd2Q04646 70 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Gtpbp2Q3UJK4 602 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 C130050O18RikQ497Y9 356 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 LpoQ5SW46 710 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Tpgs2Q66JT5 296 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Adam29Q811Q4 763 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Trmt12Q8BG71 446 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Mill2Q8HWE5 355 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Abhd17cQ8VCV1 320 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Egln3Q91UZ4 239 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Spns3Q9D232 514 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Fam69aQ9D6I7 428 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 Pfn3Q9DAD6 137 aa10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 CenpfE9Q3P4 2997 aaKnown RBP10.79□□□□□ -0.68
Col9a1-202ENSMUST00000088349 FrylF8VQ05 3007 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms