RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fgf13P70377 245 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Il12rb2P97378 874 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sox9Q04887 507 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Wdr20Q3UWE6 569 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Opa3Q505D7 179 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Taar7dQ5QD10 358 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cyb5d2Q5SSH8 263 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cxcl3Q6W5C0 100 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfand1Q8BFR6 268 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Plekhm3Q8BM47 761 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hat1Q8BY71 416 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sertm1Q8CD78 107 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Agbl3Q8CDP0 1006 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1090Q8VGA6 313 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rassf1Q99MK9 340 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pdzk1ip1Q9CQH0 114 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Msantd3Q9CR78 275 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cst11Q9D269 139 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tprg1lQ9DBS2 266 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kcnj10Q9JM63 379 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sema6cQ9WTM3 931 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lbx2Q9WUN8 195 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ybx2Q9Z2C8 360 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm45861A0A1B0GRY3 1923 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm14399A2ARW8 610 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc25a25A2ASZ8 469 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Scgb2b3D2XZ38 112 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r117K7N6V1 857 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PtgdsO09114 189 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Amd1P0DMN7 334 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nr4a1P12813 601 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gpd1P13707 349 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc6a12P31651 614 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 S100a13P97352 98 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dlk1Q09163 385 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tmem248Q3TBN1 314 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dnaaf3Q3UYV8 586 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc47a2Q3V050 573 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc5a6Q5U4D8 634 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Eri1Q7TMF2 345 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SnupnQ80W37 358 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc25a12Q8BH59 677 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Klhl31Q8BWA5 634 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc5a8Q8BYF6 611 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ncr1Q8C567 325 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Yod1Q8CB27 343 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Grhl2Q8K5C0 625 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1484Q8VEU6 315 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr651Q8VG78 313 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Camk2gQ923T9 529 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Glipr1Q9CWG1 255 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lingo1Q9D1T0 614 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Plekhj1Q9D240 164 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mrps15Q9DC71 258 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SptbP15508 2128 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r90A0A087WR36 309 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fam136b-psA0A140T8T1 138 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dmrtb1A2A9I7 359 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr294F7CWV4 335 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Angpt1O08538 498 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 BckdkO55028 412 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 AdaP03958 352 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kcne1P23299 129 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Igfbp2P47877 305 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kcnj5P48545 419 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PitpnaP53810 271 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Bod1Q5SQY2 173 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 CmahQ61419 577 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 ShhQ62226 437 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp101Q8BP18 612 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 LaynQ8C351 381 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mettl7a1Q8C6B0 244 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fam149aQ8CFV2 787 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 C1raQ8CG16 707 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sphk1Q8CI15 382 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pdlim5Q8CI51 591 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SuoxQ8R086 546 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ccm2lQ8VCC6 481 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SgtbQ8VD33 304 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr672Q8VG28 312 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Prdm9Q96EQ9 843 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pebp4Q9D9G2 242 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Acox3Q9EPL9 700 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ca5bQ9QZA0 317 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 B4galt2Q9Z2Y2 369 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Scn8aQ9WTU3 1978 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kntc1Q8C3Y4 2207 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cyp2d37-psF6YKB5 150 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r13L7N1X2 831 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Prl4a1O35256 227 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PlauP06869 433 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SnrpbP27048 231 aaKnown RBP9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Clec10aP49300 304 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RflnbQ5SVD0 216 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sntb2Q61235 520 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pou4f3Q63955 338 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cachd1Q6PDJ1 1288 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Prr14Q7TPN9 612 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tas2r135Q7TQA9 312 aa9.09□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Carnmt1Q80UY1 400 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms