RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Lrrc18Q9CQ07 262 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tmem9Q9CR23 183 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Idh3aQ9D6R2 366 aaKnown RBP6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Brix1Q9DCA5 353 aaKnown RBP6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pard6gQ9JK84 382 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tcf23Q9JLR5 209 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dnajb8Q9QYI7 227 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dock10Q8BZN6 2150 aa6.41□□□□□ -1.38
Bdnf-201ENSMUST00000053317 IsxA1A546 240 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn2r96E9PZU5 664 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn2r56E9Q4U5 779 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Polr2jO08740 117 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pax4P32115 349 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 TtlP38585 377 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Serpina7P61939 418 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rps3aP97351 264 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pld2P97813 933 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Kdm4dQ3U2K5 510 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Wdr75Q3U821 830 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Parp8Q3UD82 852 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tspan7Q62283 249 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc25a23Q6GQS1 467 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Iqcf4Q6P8Y2 204 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr835Q7TRG7 311 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Trim23Q8BGX0 574 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 PxkQ8BX57 582 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rbm4Q8C7Q4 361 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Map2k7Q8CE90 535 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rdh16f2Q8K3M1 318 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Sf3b4Q8QZY9 424 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tsen15Q8R3W5 168 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Efcab7Q8VDY4 628 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rbm4bQ8VE92 357 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Oas1hQ8VI97 369 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 TympQ99N42 471 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cmtm6Q9CZ69 183 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Med11Q9D8C6 117 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lyzl6Q9DA11 148 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 NplQ9DCJ9 320 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tinf2Q9QXG9 341 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 DptQ9QZZ6 201 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 MeltfQ9R0R1 738 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ap1m2Q9WVP1 423 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nup214Q80U93 2085 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Spaca5A2AE20 160 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr1206A2ATJ9 307 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Xlr5aA2BI45 236 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Btbd35f28A2CFD5 498 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Btbd35f30J3QML3 498 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 HgdO09173 445 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Grcc10O35127 126 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc16a8O35308 492 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nipsnap2O55126 281 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pip5k1cO70161 661 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fth1P09528 182 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Apoc3P33622 99 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Capza2P47754 286 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Drd4P51436 387 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tas2r7P59530 312 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dlx5P70396 289 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Serpinf1P97298 417 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nfatc3P97305 1075 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 4933415F23RikQ14BX6 153 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Alg11Q3TZM9 492 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc5a12Q49B93 619 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Klra2Q60660 288 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr3Q60879 313 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zp1Q62005 623 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Abcg1Q64343 666 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 CltbQ6IRU5 229 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rcn3Q8BH97 328 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gemin8Q8BHE1 238 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cpsf7Q8BTV2 471 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Aifm2Q8BUE4 373 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fbxl22Q8C7B6 236 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Trmt6Q8CE96 497 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tnfaip8l1Q8K288 186 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 PiguQ8K358 434 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dennd2dQ91VV4 469 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ndufb2Q9CPU2 105 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Use1Q9CQ56 270 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 CsQ9CZU6 464 aaKnown RBP6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gkn3Q9D0T7 191 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ppil3Q9D6L8 161 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mbd3l1Q9D9H3 186 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lrrc51Q9DAK8 192 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Med27Q9DB40 311 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tgm1Q9JLF6 815 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cldn6Q9Z262 219 aa6.4□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dchs1E9PVD3 3291 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm29276A0A087WNW5 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21117A0A087WPJ9 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm20820A0A087WPP3 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm20937A0A087WQA3 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21258A0A087WQC7 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm28102A0A087WQL3 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21095A0A087WR14 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm20792A0A087WRF5 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm28490A0A087WRT9 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21294A0A087WS79 222 aa6.4□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms