RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Trim45Q6PFY8 580 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Znf503Q7TMA2 652 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Efcab3Q80X60 432 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 SvopQ8BFT9 548 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Fbxw13Q8BI57 466 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Palm2Q8BR92 376 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Slc25a21Q8BZ09 298 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Olfr340Q8VGL0 312 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Acot7Q91V12 381 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Ccdc77Q9CZH8 489 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Abcb10Q9JI39 715 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Ldb3Q9JKS4 723 aaKnown RBP13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Zfhx4Q9JJN2 3550 aa13.46□□□□□ -0.25
Ercc1-201ENSMUST00000003645 Dennd4cA6H8H2 1906 aa13.46□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm4787B2RUD9 748 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pdzd8B9EJ80 1147 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tmem233D3Z1U7 110 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Macc1E9PXX8 851 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 A530032D15RikE9Q422 215 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm3115L7N285 211 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 NgpO08692 167 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Orm2P07361 207 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cd14P10810 366 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gnao1P18872 354 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 LipcP27656 510 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pax7P47239 503 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mfap2P55002 183 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pex2P55098 305 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hcrtr2P58308 460 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cdkn2dQ60773 166 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Usf1Q61069 310 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Adam12Q61824 903 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tas2r13Q7M720 305 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Syt16Q7TN83 639 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Btnl1Q7TST0 509 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ugt2a1Q80X89 528 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Krt75Q8BGZ7 551 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm10330Q8BKS1 112 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 March11Q8CBH7 400 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc25a1Q8JZU2 311 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc35a3Q8R1T4 326 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Vmn1r193Q8R258 319 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Vmn1r198Q8R263 300 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Utp4Q8R2N2 686 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tspan10Q8VCF5 331 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr98Q8VFD9 309 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr1467Q8VFW1 308 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr341Q8VGK9 313 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr649Q8VGW1 312 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pcdh18Q8VHR0 1134 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Clec2dQ91V08 207 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 GsdmcQ99NB5 468 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ttc25Q9D4B2 624 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Bco1Q9JJS6 566 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hs6st1Q9QYK5 411 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Nfkb2Q9WTK5 899 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Eif2s3xQ9Z0N1 472 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Espl1P60330 2118 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 BptfA2A654 3036 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Kiaa1324A2AFS3 1009 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr1097A2AVA9 315 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mn1D3YWE6 1297 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Zfp558E9Q1J0 407 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 A430033K04RikE9Q8G5 680 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr292F8VQ84 308 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gtpbp1O08582 668 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc10a1O08705 362 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Emp3O35912 163 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tulp3O88413 460 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 P01808 119 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ccnd1P25322 295 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Htr1bP28334 386 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hoxc5P32043 222 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 CntfP51642 198 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lrrn4P59383 733 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Adamts15P59384 950 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 EbpP70245 230 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 EgflamQ4VBE4 1017 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 WhammQ571B6 793 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc17a4Q5NCM1 492 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lefty1Q64280 368 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Adamts16Q69Z28 1222 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Egfl8Q6GUQ1 293 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm5416Q6IE28 97 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Prrg3Q6PAQ9 231 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr684Q7TRN8 312 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cpeb2Q812E0 521 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tmsb15lQ8C0W0 80 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Med19Q8C1S0 244 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pdlim5Q8CI51 591 aaKnown RBP13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ctxn1Q8K129 82 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Prokr2Q8K458 381 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mrgpra3Q91WW3 302 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Snx4Q91YJ2 450 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 P2ry4Q9JJS7 361 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tyk2Q9R117 1184 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Trim3Q9R1R2 744 aa13.45□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm42517A0A1Y7VLQ2 374 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Fam47eD3YWC7 402 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm10799F7C7U2 104 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms