RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 DNAJB12Q9NXW2 375 aaKnown RBP24.04■■□□□ 1.44
VEGFA-231ENST00000640499 A0A0G2JPF8 293 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 LOC100653049A0A140TA62 436 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 HNRNPCL2B2RXH8 293 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 HNRNPCL3B7ZW38 293 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 C19orf84I3L1E1 186 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 SEC14L5O43304 696 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 HNRNPCL1O60812 293 aaKnown RBP24.03■■□□□ 1.44
VEGFA-231ENST00000640499 KRT34O76011 436 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 NUDT14O95848 222 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 TGM6O95932 706 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 DBIP07108 87 aaKnown RBP24.03■■□□□ 1.44
VEGFA-231ENST00000640499 HNRNPCL4P0DMR1 293 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 CHRNB4P30926 498 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 MTPNP58546 118 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 CBFBQ13951 182 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 GCNT6Q5T4J0 391 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 OR52P1PQ8NH57 321 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 SMPDL3BQ92485 455 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 ZNF845Q96IR2 970 aaPredicted RBP24.03■■□□□ 1.44
VEGFA-231ENST00000640499 SLC39A3Q9BRY0 314 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 CCDC106Q9BWC9 280 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 RLIMQ9NVW2 624 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 COQ3Q9NZJ6 369 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 CALML5Q9NZT1 146 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 KLF2Q9Y5W3 355 aaPredicted RBP24.03■■□□□ 1.44
VEGFA-231ENST00000640499 NBPF19A0A087WUL8 3843 aa24.03■■□□□ 1.44
VEGFA-231ENST00000640499 MED12LQ86YW9 2145 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 SNX3O60493 162 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 PGM3O95394 542 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 NID1P14543 1247 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 HTR1EP28566 365 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 EIF1P41567 113 aaKnown RBP24.02■■□□□ 1.44
VEGFA-231ENST00000640499 CCR4P51679 360 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 ZNF136P52737 540 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 DLX5P56178 289 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 RAC1P63000 192 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 EEF1A1P68104 462 aaKnown RBP24.02■■□□□ 1.44
VEGFA-231ENST00000640499 MRPL2Q5T653 305 aaKnown RBP24.02■■□□□ 1.44
VEGFA-231ENST00000640499 REP15Q6BDI9 236 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 ZNF836Q6ZNA1 936 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 PTOV1Q86YD1 416 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 CMIPQ8IY22 773 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 CLIP4Q8N3C7 705 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 NFKBIDQ8NI38 313 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 WDR60Q8WVS4 1066 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 ASB5Q8WWX0 329 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 FAM107BQ9H098 131 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 TMEM185BQ9H7F4 350 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 EXOSC3Q9NQT5 275 aaKnown RBP24.02■■□□□ 1.44
VEGFA-231ENST00000640499 MRGBPQ9NV56 204 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 GPC6Q9Y625 555 aaPredicted RBP24.02■■□□□ 1.44
VEGFA-231ENST00000640499 CAPN7Q9Y6W3 813 aa24.02■■□□□ 1.44
VEGFA-231ENST00000640499 AP3D1O14617 1153 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 IL7RP16871 459 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 ADH6P28332 368 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 GZMMP51124 257 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 SESN3P58005 492 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 SF3B4Q15427 424 aaKnown RBP eCLIP24.01■■□□□ 1.432e-10■■■□□ 18
VEGFA-231ENST00000640499 COQ5Q5HYK3 327 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 PRAMEF8Q5VWM4 474 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 PRAMEF7Q5VXH5 474 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 MTDHQ86UE4 582 aaKnown RBP24.01■■□□□ 1.43
VEGFA-231ENST00000640499 TREML1Q86YW5 311 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 PEX5LQ8IYB4 626 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 METTL25Q8N6Q8 603 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 CA5BP1Q8WTZ4 195 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 MRGPRX4Q96LA9 322 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 MYLK2Q9H1R3 596 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 TMEM38AQ9H6F2 299 aa24.01■■□□□ 1.43
VEGFA-231ENST00000640499 A0A0J9YW62 118 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 CDHR4A6H8M9 788 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 NKX2-6A6NCS4 301 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 EVPLLA8MZ36 301 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 FAM47E-STBD1D6RA91 191 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 PRSS44E7EML9 344 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 ADAMDEC1O15204 470 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 SLC22A2O15244 555 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 CDK6Q00534 326 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 TFF3Q07654 80 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 FOXF2Q12947 444 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 TRMT5Q32P41 509 aaKnown RBP24■■□□□ 1.43
VEGFA-231ENST00000640499 NANOGP8Q6NSW7 305 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 LILRA2Q8N149 483 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 MEIOBQ8N635 442 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 POU5F2Q8N7G0 328 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 FIG4Q92562 907 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 WNT2BQ93097 391 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 LRRC58Q96CX6 371 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 KAT8Q9H7Z6 458 aaKnown RBP24■■□□□ 1.43
VEGFA-231ENST00000640499 NANOGQ9H9S0 305 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 ACER3Q9NUN7 267 aa24■■□□□ 1.43
VEGFA-231ENST00000640499 ZNF443Q9Y2A4 671 aaPredicted RBP24■■□□□ 1.43
VEGFA-231ENST00000640499 CYSRT1A8MQ03 144 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 GCM2O75603 506 aaPredicted RBP23.99■■□□□ 1.43
VEGFA-231ENST00000640499 THBS1P07996 1170 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 RYKP34925 604 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 COMTD1Q86VU5 262 aa23.99■■□□□ 1.43
VEGFA-231ENST00000640499 RELL2Q8NC24 303 aaPredicted RBP23.99■■□□□ 1.43
VEGFA-231ENST00000640499 BBS10Q8TAM1 723 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms