RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NGFRP08138 427 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 RPS4Y1P22090 263 aaKnown RBP13.21□□□□□ -0.29
LINC00339-208ENST00000634934 CASP3P42574 277 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 CRYBA2P53672 197 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ZADH2Q8N4Q0 377 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 EXD3Q8N9H8 876 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 PSD4Q8NDX1 1056 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 FNDC8Q8TC99 324 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 PHOSPHO1Q8TCT1 267 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF566Q969W8 418 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 C12orf43Q96C57 262 aaKnown RBP13.21□□□□□ -0.29
LINC00339-208ENST00000634934 NRBF2Q96F24 287 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 C5orf34Q96MH7 638 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 GALNT9Q9HCQ5 603 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 KLHL1Q9NR64 748 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-208ENST00000634934 SACM1LQ9NTJ5 587 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ADPRHL2Q9NX46 363 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 CNIH4Q9P003 139 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ALG1L2C9J202 215 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 K7EM74 188 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
LINC00339-208ENST00000634934 SUV39H1O43463 412 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 NDUFB5O43674 189 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 PDGFAP04085 211 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 THRBP10828 461 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 NID1P14543 1247 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 CD46P15529 392 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 KCNJ10P78508 379 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 KCNAB2Q13303 367 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF829Q3KNS6 432 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF836Q6ZNA1 936 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 CLVS1Q8IUQ0 354 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-208ENST00000634934 EID3Q8N140 333 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 MDS2Q8NDY4 140 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 FBLIM1Q8WUP2 373 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 TPD52L3Q96J77 140 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
LINC00339-208ENST00000634934 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
LINC00339-208ENST00000634934 HES7Q9BYE0 225 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 RPS6KA6Q9UK32 745 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 SLC13A4Q9UKG4 626 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 CSAG2Q9Y5P2 127 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 HSPE1-MOB4S4R3N1 261 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 V9GYQ6 96 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 CPAMD8Q8IZJ3 1885 aa13.2□□□□□ -0.3
LINC00339-208ENST00000634934 A0A1W2PQD3 144 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 H3BMQ9 156 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 TPST1O60507 370 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 DPM1O60762 260 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CYP7B1O75881 506 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CSTAP01040 98 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 THBS1P07996 1170 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 SP1P08047 785 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 INHBBP09529 407 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 PRKAR1BP31321 381 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 MAGEA2P43356 314 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CD97P48960 835 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 TNFSF10P50591 281 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 GPR85P60893 370 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 FGFBP1Q14512 234 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 RAB39AQ14964 217 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CD226Q15762 336 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF766Q5HY98 468 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 MRPL2Q5T653 305 aaKnown RBP13.19□□□□□ -0.3
LINC00339-208ENST00000634934 SLC25A25Q6KCM7 469 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 SLC30A6Q6NXT4 461 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
LINC00339-208ENST00000634934 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CLIP4Q8N3C7 705 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 OIT3Q8WWZ8 545 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 BORCS5Q969J3 196 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 COG8Q96MW5 612 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 DOHHQ9BU89 302 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 PINK1Q9BXM7 581 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 RSPO3Q9BXY4 272 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-208ENST00000634934 ANGPTL4Q9BY76 406 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 DCAF13Q9NV06 445 aaKnown RBP13.19□□□□□ -0.3
LINC00339-208ENST00000634934 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 B3GNT3Q9Y2A9 372 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 TP53TG5Q9Y2B4 290 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 PCDHGB7Q9Y5F8 929 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
LINC00339-208ENST00000634934 TNRC6AQ8NDV7 1962 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms