RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 OR4D9Q8NGE8 314 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 MS4A3Q96HJ5 214 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 OR2M2Q96R28 347 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 TTTY10Q9BZA0 68 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 MRPS7Q9Y2R9 242 aaKnown RBP18.9■□□□□ 0.62
NEK3-208ENST00000618534 CHD7Q9P2D1 2997 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 TRAV27A0A087WT01 109 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 A0A1W2PRG6 482 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 GPR89AB7ZAQ6 455 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 GPR89BP0CG08 455 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 SNRPBP14678 240 aaKnown RBP18.9■□□□□ 0.62
NEK3-208ENST00000618534 RAB3BP20337 219 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 PRMT2P55345 433 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 SIM1P81133 766 aaPredicted RBP18.9■□□□□ 0.62
NEK3-208ENST00000618534 SSX6Q7RTT6 188 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 ADGRD2Q7Z7M1 963 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 OR2L13Q8N349 312 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 ZFP3Q96NJ6 502 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 TIMM29Q9BSF4 260 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 ERVMER34-1Q9H9K5 563 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 PHPT1Q9NRX4 125 aaPredicted RBP18.9■□□□□ 0.62
NEK3-208ENST00000618534 A0A1W2PPK0 400 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 RCBTB2O95199 551 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 GYPBP06028 91 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 THBS1P07996 1170 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 SAGP10523 405 aaPredicted RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 NDUFS1P28331 727 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 PYCR1P32322 319 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 CTNNB1P35222 781 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 WASP42768 502 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 TAS2R43P59537 309 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 TNFRSF17Q02223 184 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 CRMP1Q14194 572 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 RPE65Q16518 533 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 GARNL3Q5VVW2 1013 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 ESPNLQ6ZVH7 1005 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 ASPGQ86U10 573 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 RFLNBQ8N5W9 214 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 SMPDL3BQ92485 455 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 GHSRQ92847 366 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 PEX11GQ96HA9 241 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 CACNG6Q9BXT2 260 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 HEXA-AS1Q9H8Q6 139 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 FBXO34Q9NWN3 711 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 TMEM5Q9Y2B1 443 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 PRR23AA6NEV1 266 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 PEX12O00623 359 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 RAF1P04049 648 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 TPOP07202 933 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 ATF1P18846 271 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 SLC2A5P22732 501 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 SRP54P61011 504 aaKnown RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 HTRA4P83105 476 aaPredicted RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 DEFB115Q30KQ5 88 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 DMKNQ6E0U4 476 aaPredicted RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 RNF113BQ8IZP6 322 aaKnown RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 OR8H3Q8N146 312 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 GAL3ST3Q96A11 431 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 TRIM43Q96BQ3 446 aaPredicted RBP18.89■□□□□ 0.61
NEK3-208ENST00000618534 BPIFA2Q96DR5 249 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 KCNE5Q9UJ90 142 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 SIGLEC7Q9Y286 467 aa18.89■□□□□ 0.61
NEK3-208ENST00000618534 CEACAM5P06731 702 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 TRMT12Q53H54 448 aaKnown RBP18.88■□□□□ 0.61
NEK3-208ENST00000618534 FAAH2Q6GMR7 532 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 RTL10Q7L3V2 364 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 LUZP2Q86TE4 346 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 SLC44A3Q8N4M1 653 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 BEST4Q8NFU0 473 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 OR51A7Q8NH64 312 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 ZNF350Q9GZX5 532 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 SCN2AQ99250 2005 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 LINC00862A6NCI5 91 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 RIIAD1A6NNX1 92 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 DNAJB6O75190 326 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 UBL3O95164 117 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 AP2S1P53680 142 aaPredicted RBP18.88■□□□□ 0.61
NEK3-208ENST00000618534 ID2Q02363 134 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 MTFR2Q6P444 385 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 ZNF687Q8N1G0 1237 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 ZNF619Q8N2I2 560 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 OR4K14Q8NGD5 310 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 OR6C4Q8NGE1 309 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 ZCCHC10Q8TBK6 192 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 SLC35A3Q9Y2D2 325 aa18.88■□□□□ 0.61
NEK3-208ENST00000618534 MAGEB4O15481 346 aaPredicted RBP18.87■□□□□ 0.61
NEK3-208ENST00000618534 PPP1R3DO95685 299 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 TIMP1P01033 207 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 MT-ND4P03905 459 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 ANKRD34CP0C6C1 535 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 MMP15P51511 669 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 NRG3P56975 720 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 GSG1Q2KHT4 349 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 FAM78AQ5JUQ0 283 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 SDE2Q6IQ49 451 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 HDDC3Q8N4P3 179 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 OR51Q1Q8NH59 317 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 HAVCR2Q8TDQ0 301 aa18.87■□□□□ 0.61
NEK3-208ENST00000618534 GIMAP1Q8WWP7 306 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms