RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 AP4B1Q9Y6B7 739 aa15.06■□□□□ 0
CBWD3-211ENST00000615061 SPG11Q96JI7 2443 aa15.05■□□□□ 0
CBWD3-211ENST00000615061 CTU2Q2VPK5 515 aaKnown RBP15.05■□□□□ -0
CBWD3-211ENST00000615061 TOR1AIP2Q8NFQ8 470 aa15.05■□□□□ -0
CBWD3-211ENST00000615061 CNOT9Q92600 299 aaKnown RBP15.05■□□□□ -0
CBWD3-211ENST00000615061 INTS12Q96CB8 462 aaKnown RBP15.05■□□□□ -0
CBWD3-211ENST00000615061 UCN2Q96RP3 112 aa15.05■□□□□ -0
CBWD3-211ENST00000615061 TREX2Q9BQ50 279 aaPredicted RBP15.05■□□□□ -0
CBWD3-211ENST00000615061 NDUFAF1Q9Y375 327 aa15.05■□□□□ -0
CBWD3-211ENST00000615061 RPS4Y1P22090 263 aaKnown RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 RYKP34925 604 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 SFTPDP35247 375 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 MAGEA8P43361 318 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 EIF1AXP47813 144 aaKnown RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 RAC1P63000 192 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 CBFBQ13951 182 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 PON3Q15166 354 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 CHMP1BQ7LBR1 199 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 LILRA2Q8N149 483 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 FNDC9Q8TBE3 224 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 WNT2BQ93097 391 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 ADGRG7Q96K78 797 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 MTHFD2LQ9H903 347 aaPredicted RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 LEF1Q9UJU2 399 aaPredicted RBP15.04■□□□□ -0
CBWD3-211ENST00000615061 SLC35A3Q9Y2D2 325 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 DSPPQ9NZW4 1301 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 AKAP6Q13023 2319 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 ABCA4P78363 2273 aa15.04■□□□□ -0
CBWD3-211ENST00000615061 A0A0J9YW62 118 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 SLC22A20A6NK97 555 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 TNFSF11O14788 317 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 ANGPT2O15123 496 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 DNAJA2O60884 412 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 NTN1O95631 604 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 TMIGD3P0DMS9 266 aaPredicted RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 IL7RP16871 459 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 EIF1P41567 113 aaKnown RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 CRISP3P54108 245 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 GYS2P54840 703 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 FADDQ13158 208 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 VRK2Q86Y07 508 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 METTL25Q8N6Q8 603 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 ATP6V1C2Q8NEY4 427 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 WDR60Q8WVS4 1066 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 C10orf82Q8WW14 230 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 MARVELD3Q96A59 401 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 SAR1AQ9NR31 198 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 RLIMQ9NVW2 624 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 KLHL14Q9P2G3 628 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 GPC6Q9Y625 555 aaPredicted RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 FREM1Q5H8C1 2179 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 FBP2O00757 339 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 DVL2O14641 736 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 RCBTB2O95199 551 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 BMP2P12643 396 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 PRF1P14222 555 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 CTSSP25774 331 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 SESN3P58005 492 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 SELPLGQ14242 412 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 MRPL2Q5T653 305 aaKnown RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 PPP4R4Q6NUP7 873 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 P4HA3Q7Z4N8 544 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 DHDDSQ86SQ9 333 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 OR10D3Q8NH80 312 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 OIT3Q8WWZ8 545 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 MRGPRX4Q96LA9 322 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 TM9SF2Q99805 663 aa15.03■□□□□ -0
CBWD3-211ENST00000615061 CPPED1Q9BRF8 314 aaPredicted RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 DNAJB12Q9NXW2 375 aaKnown RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 ZNF629Q9UEG4 869 aaPredicted RBP15.03■□□□□ -0
CBWD3-211ENST00000615061 ETV2O00321 342 aaPredicted RBP15.02□□□□□ -0.01
CBWD3-211ENST00000615061 AP3D1O14617 1153 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 CXCL13O43927 109 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 AQP8O94778 261 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 DBIP07108 87 aaKnown RBP15.02□□□□□ -0.01
CBWD3-211ENST00000615061 NID1P14543 1247 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 ME2P23368 584 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 ADH6P28332 368 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 SEC24CP53992 1094 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 EEFSECP57772 596 aaKnown RBP15.02□□□□□ -0.01
CBWD3-211ENST00000615061 RPS3AP61247 264 aaKnown RBP15.02□□□□□ -0.01
CBWD3-211ENST00000615061 SNTB1Q13884 538 aaKnown RBP15.02□□□□□ -0.01
CBWD3-211ENST00000615061 SGCBQ16585 318 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 SLC25A35Q3KQZ1 300 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 SLC25A53Q5H9E4 307 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 ZNF836Q6ZNA1 936 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 DPP10Q8N608 796 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 OR52P1PQ8NH57 321 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 RAD21L1Q9H4I0 556 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 A4GALTQ9NPC4 353 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 CHST2Q9Y4C5 530 aa15.02□□□□□ -0.01
CBWD3-211ENST00000615061 ADAMDEC1O15204 470 aa15.01□□□□□ -0.01
CBWD3-211ENST00000615061 HNRNPRO43390 633 aaKnown RBP15.01□□□□□ -0.01
CBWD3-211ENST00000615061 COX6B1P14854 86 aa15.01□□□□□ -0.01
CBWD3-211ENST00000615061 PGCP20142 388 aa15.01□□□□□ -0.01
CBWD3-211ENST00000615061 ELK4P28324 431 aa15.01□□□□□ -0.01
CBWD3-211ENST00000615061 SLC6A8P48029 635 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms