RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 VRK2Q86Y07 508 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 MISPQ8IVT2 679 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 DMRTC2Q8IXT2 367 aaPredicted RBP11.37□□□□□ -0.59
CSTF1-208ENST00000613138 METTL25Q8N6Q8 603 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 TRIML2Q8N7C3 387 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 OR5W2Q8NH69 310 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 ROBO4Q8WZ75 1007 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 LRRC46Q96FV0 321 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 UCN2Q96RP3 112 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 LAT2Q9GZY6 243 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 RLIMQ9NVW2 624 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 VAPAQ9P0L0 249 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 AP4B1Q9Y6B7 739 aa11.37□□□□□ -0.59
CSTF1-208ENST00000613138 A0A087WZY1 265 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 IGHV3-15A0A0B4J1V0 119 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 H3BNH8 94 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 DVL2O14641 736 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 NTN1O95631 604 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 KRT75O95678 551 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 ZCCHC18P0CG32 403 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 KIR2DL2P43627 348 aaPredicted RBP11.36□□□□□ -0.59
CSTF1-208ENST00000613138 ASCL1P50553 236 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 DSTNP60981 165 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 SELPLGQ14242 412 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 SQLEQ14534 574 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 TMEM176BQ3YBM2 270 aaPredicted RBP11.36□□□□□ -0.59
CSTF1-208ENST00000613138 CHMP1BQ7LBR1 199 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 BTLAQ7Z6A9 289 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 LILRA2Q8N149 483 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 CNEP1R1Q8N9A8 125 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 FAM71CQ8NEG0 241 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 LINC01560Q8TB33 94 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 SLC38A5Q8WUX1 472 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 ZBTB8AQ96BR9 441 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 STARD4Q96DR4 205 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 TMEM19Q96HH6 336 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
CSTF1-208ENST00000613138 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 OPN3Q9H1Y3 402 aaPredicted RBP11.36□□□□□ -0.59
CSTF1-208ENST00000613138 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 COQ10BQ9H8M1 238 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
CSTF1-208ENST00000613138 A0A096LPI6 279 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 TRBV5-3A0A0A0MS03 114 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 C7orf72A4D263 438 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 AGAP5A6NIR3 686 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 CLIC1O00299 241 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 EIF4E2O60573 245 aaKnown RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 TFPTP0C1Z6 253 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 GKN3PP0CG01 181 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 CCNA2P20248 432 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 RPS4Y1P22090 263 aaKnown RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 PEX19P40855 299 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 SESN3P58005 492 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 RAC1P63000 192 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 KCNJ10P78508 379 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 HPCAP84074 193 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 TLE4Q04727 773 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 RGNQ15493 299 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 SGCBQ16585 318 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 MRPL2Q5T653 305 aaKnown RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 HBMQ6B0K9 141 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 ZNF836Q6ZNA1 936 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 LRRC74BQ6ZQY2 392 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 MSANTD1Q6ZTZ1 278 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 EIF3MQ7L2H7 374 aaKnown RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 COMTD1Q86VU5 262 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 NRGNQ92686 78 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 OSTF1Q92882 214 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 KLHL15Q96M94 604 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 TM9SF2Q99805 663 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 ACBD3Q9H3P7 528 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 DNAJB12Q9NXW2 375 aaKnown RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 CRIM1Q9NZV1 1036 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 JKAMPQ9P055 326 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 STOML1Q9UBI4 398 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 ZNF629Q9UEG4 869 aaPredicted RBP11.35□□□□□ -0.59
CSTF1-208ENST00000613138 MYO9AB2RTY4 2548 aa11.35□□□□□ -0.59
CSTF1-208ENST00000613138 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 SYT5O00445 386 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 FRS3O43559 492 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 DNAJA2O60884 412 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSTF1-208ENST00000613138 AGR2O95994 175 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 VIMP08670 466 aaKnown RBP11.34□□□□□ -0.59
CSTF1-208ENST00000613138 PRG2P13727 222 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 OPRM1P35372 400 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 ATP4BP51164 291 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 SUMO3P55854 103 aaPredicted RBP11.34□□□□□ -0.59
CSTF1-208ENST00000613138 EEF1A1P68104 462 aaKnown RBP11.34□□□□□ -0.59
CSTF1-208ENST00000613138 HOXC5Q00444 222 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 MERTKQ12866 999 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 CBFBQ13951 182 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 GUSBP1Q15486 140 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 LRIF1Q5T3J3 769 aa11.34□□□□□ -0.59
CSTF1-208ENST00000613138 EEF1A1P5Q5VTE0 462 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms