RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CSNK2BP67870 215 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 PRKCDQ05655 676 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 CBLN3Q6UW01 205 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 LINC00114Q6XXX2 140 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 MARCH3Q86UD3 253 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 APH1BQ8WW43 257 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 DEFB126Q9BYW3 111 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 RTN4RQ9BZR6 473 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 FOXJ2Q9P0K8 574 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 TCFL5Q9UL49 500 aa19.77■□□□□ 0.76
USP6NL-204ENST00000606752 MPZL2O60487 215 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 GABRB1P18505 474 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 EVI2BP34910 448 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 GPR4P46093 362 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 GIPRP48546 466 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 TEKQ02763 1124 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 PLAG1Q6DJT9 500 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 KIF18BQ86Y91 864 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 P3H2Q8IVL5 708 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 CDK20Q8IZL9 346 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 M1APQ8TC57 530 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 PHOX2BQ99453 314 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 SCN3BQ9NY72 215 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 FARSAQ9Y285 508 aaKnown RBP19.76■□□□□ 0.75
USP6NL-204ENST00000606752 TMEM5Q9Y2B1 443 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 TPRKBQ9Y3C4 175 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 A0A1W2PQ72 361 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 EIF4E2O60573 245 aaKnown RBP19.76■□□□□ 0.75
USP6NL-204ENST00000606752 SLC6A8P48029 635 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 C12orf73Q69YU5 71 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 WBP2NLQ6ICG8 309 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 ZNF773Q6PK81 442 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 ESX1Q8N693 406 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 TMCO5AQ8N6Q1 288 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 OR11G2Q8NGC1 345 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 PFN4Q8NHR9 129 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 DSN1Q9H410 356 aa19.76■□□□□ 0.75
USP6NL-204ENST00000606752 SOCS6O14544 535 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 HCRTR2O43614 444 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 XPNPEP2O43895 674 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 IFI30P13284 250 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 PTNP21246 168 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 CCR4P51679 360 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 CTBP2P56545 445 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 CDK5Q00535 292 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 GINS1Q14691 196 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 SMN1Q16637 294 aaKnown RBP19.75■□□□□ 0.75
USP6NL-204ENST00000606752 BROXQ5VW32 411 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 PTCHD4Q6ZW05 846 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 NDUFAF7Q7L592 441 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 TEX47Q8TBZ9 253 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 TRUB1Q8WWH5 349 aaKnown RBP19.75■□□□□ 0.75
USP6NL-204ENST00000606752 TMCO6Q96DC7 493 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 EGLN3Q9H6Z9 239 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 MMP25Q9NPA2 562 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 C20orf141Q9NUB4 165 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 IL20Q9NYY1 176 aa19.75■□□□□ 0.75
USP6NL-204ENST00000606752 A0A087WUJ7 227 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 PTGES3LE9PB15 166 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 FTH1P19P0C7X4 201 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 FBXW4P57775 412 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 RPS15P62841 145 aaKnown RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 ZNF117Q03924 483 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SSPNQ14714 243 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 CASP12Q6UXS9 341 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 TMPRSS11FQ6ZWK6 438 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 NUP54Q7Z3B4 507 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 CCDC103Q8IW40 242 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SLC22A8Q8TCC7 542 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 OSTF1Q92882 214 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 BPIFA2Q96DR5 249 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 CCNL2Q96S94 520 aaPredicted RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 MEPEQ9NQ76 525 aaPredicted RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 CDC42EP2O14613 210 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 OR2J2O76002 312 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 MAKP20794 623 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 TMED10P49755 219 aaKnown RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SMSP52788 366 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SATL1Q86VE3 508 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SLC15A4Q8N697 577 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 CLDN22Q8N7P3 220 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 OR5M3Q8NGP4 307 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 TTC9Q92623 222 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 HGDQ93099 445 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 C3orf49Q96BT1 292 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SH3YL1Q96HL8 342 aaPredicted RBP19.74■□□□□ 0.75
USP6NL-204ENST00000606752 DPH1Q9BZG8 443 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 PLA2G12AQ9BZM1 189 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 B3GNT4Q9C0J1 378 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 DUSP21Q9H596 190 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 SLC25A19Q9HC21 320 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 ATP13A2Q9NQ11 1180 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 PLCXD1Q9NUJ7 323 aa19.74■□□□□ 0.75
USP6NL-204ENST00000606752 NSG1A0A0A6YYJ2 146 aa19.73■□□□□ 0.75
USP6NL-204ENST00000606752 SPAARA0A1B0GVQ0 90 aa19.73■□□□□ 0.75
USP6NL-204ENST00000606752 M0R129 80 aa19.73■□□□□ 0.75
USP6NL-204ENST00000606752 KPNA4O00629 521 aaPredicted RBP19.73■□□□□ 0.75
USP6NL-204ENST00000606752 TNFSF15O95150 251 aa19.73■□□□□ 0.75
USP6NL-204ENST00000606752 ALDH3B2P48448 385 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms