RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FAM83FQ8NEG4 500 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SDR9C7Q8NEX9 313 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 OR9A2Q8NGT5 310 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF480Q8WV37 535 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LHX4Q969G2 390 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 MYLPFQ96A32 169 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 LCORQ96JN0 433 aaPredicted RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF778Q96MU6 729 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SFXN2Q96NB2 322 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLIRPQ9GZT3 109 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 FAM83DQ9H4H8 585 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 IL1RAPQ9NPH3 570 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 XPNPEP3Q9NQH7 507 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC22A11Q9NSA0 550 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ADA2Q9NZK5 511 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 GPR160Q9UJ42 338 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 NDRG2Q9UN36 371 aaKnown RBP4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 ERVW-1Q9UQF0 538 aa4.66□□□□□ -1.66
SPTBN1-206ENST00000602898 SRCAPQ6ZRS2 3230 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 HMX2A2RU54 273 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 TCP10L2B9ZVM9 353 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM49D1C9J1S8 452 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 M0QZ92 97 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 KPNA3O00505 521 aaPredicted RBP4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 PMPCBO75439 489 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 RBMXL2O75526 392 aaKnown RBP4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 C9P02748 559 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 APRTP07741 180 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 HLA-EP13747 358 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 CHRNB2P17787 502 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 DRD1P21728 446 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 S100A7P31151 101 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 ETV6P41212 452 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 XKP51811 444 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 NR0B1P51843 470 aaKnown RBP4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 EGR3Q06889 387 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 PDIA2Q13087 525 aaKnown RBP4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 MTAPQ13126 283 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 ARHGEF7Q14155 803 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 ADPRMQ3LIE5 342 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC35D3Q5M8T2 416 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 HACD4Q5VWC8 232 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 OR52W1Q6IF63 320 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 AADACL2Q6P093 401 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 C16orf89Q6UX73 402 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 DHFR2Q86XF0 187 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC35F3Q8IY50 421 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 NLGN4XQ8N0W4 816 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 C4orf32Q8N8J7 132 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 DNAAF1Q8NEP3 725 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 RAB40AQ8WXH6 277 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 C22orf15Q8WYQ4 148 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 ADAM2Q99965 735 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM47Q9BQJ4 181 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 TMPRSS13Q9BYE2 586 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 GANQ9H2C0 597 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 WDR76Q9H967 626 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 LPAR2Q9HBW0 351 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 GKN1Q9NS71 199 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 MARCH2Q9P0N8 246 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 NUFIP1Q9UHK0 495 aaKnown RBP4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 PITPNC1Q9UKF7 332 aa4.65□□□□□ -1.66
SPTBN1-206ENST00000602898 PNMA8CA0A1B0GUJ8 204 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 SDR42E2A6NKP2 422 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ANKRD30BLA7E2S9 258 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 FCGR3BO75015 233 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 SRP72O76094 671 aaKnown RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C2P06681 752 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 GUSBP08236 651 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 RAB3BP20337 219 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 MSR1P21757 451 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 DTYMKP23919 212 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 TEAD1P28347 426 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 COILP38432 576 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 LBX1P52954 281 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 RAG2P55895 527 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 EEFSECP57772 596 aaKnown RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 GTF2BQ00403 316 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 SEMG2Q02383 582 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 NHLH2Q02577 135 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ZFP36L1Q07352 338 aaKnown RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ECH1Q13011 328 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 GPR17Q13304 367 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 NAE1Q13564 534 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 LRRC26Q2I0M4 334 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 LIPKQ5VXJ0 399 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 CD163Q86VB7 1156 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 CCDC71Q8IV32 467 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ZDHHC23Q8IYP9 409 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C8orf59Q8N0T1 100 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C1orf87Q8N0U7 546 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF557Q8N988 423 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 ACBD4Q8NC06 268 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C2CD4AQ8NCU7 369 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 OR52N2Q8NGI0 321 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 OR13C9Q8NGT0 318 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C9orf43Q8TAL5 461 aaPredicted RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM110BQ8TC76 370 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 PHOSPHO1Q8TCT1 267 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 TM6SF2Q9BZW4 377 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms