RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 NID1P14543 1247 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 COL8A1P27658 744 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 SHC1P29353 583 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 ADSLP30566 484 aaPredicted RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 ART3Q13508 389 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 QPRTQ15274 297 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 SLC25A53Q5H9E4 307 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 MRPL2Q5T653 305 aaKnown RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 RIPPLY2Q5TAB7 128 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 REP15Q6BDI9 236 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 ZNF836Q6ZNA1 936 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 MTDHQ86UE4 582 aaKnown RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 LSRQ86X29 649 aaPredicted RBP13.5□□□□□ -0.25
SCN1B-204ENST00000596348 TREML1Q86YW5 311 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CMIPQ8IY22 773 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 PEX5LQ8IYB4 626 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 POU5F2Q8N7G0 328 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 OR10Q1Q8NGQ4 319 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 OR52P1PQ8NH57 321 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 FBXO27Q8NI29 283 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 NFKBIDQ8NI38 313 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 TMEM185BQ9H7F4 350 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CALHM2Q9HA72 323 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 BCL2L10Q9HD36 194 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 RLIMQ9NVW2 624 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 FAM53CQ9NYF3 392 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CLCF1Q9UBD9 225 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CORO2BQ9UQ03 480 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 CHST2Q9Y4C5 530 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
SCN1B-204ENST00000596348 NAV2Q8IVL1 2488 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 A0A0G2JPF8 293 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MBD3L4A6NDZ8 208 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MBD3L3A6NE82 208 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 TMEM247A6NEH6 219 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MBD3L5A6NJ08 208 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 BBIP1A8MTZ0 92 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 EVPLLA8MZ36 301 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 HNRNPCL2B2RXH8 293 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 HNRNPCL3B7ZW38 293 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 AP3D1O14617 1153 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 HNRNPCL1O60812 293 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 PGM3O95394 542 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CLDN14O95500 239 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 HNRNPCL4P0DMR1 293 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 IL7RP16871 459 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CHRNB4P30926 498 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 RYKP34925 604 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 EIF1P41567 113 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 EEF1A1P68104 462 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CDK6Q00534 326 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CBFBQ13951 182 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 GNA13Q14344 377 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CTU2Q2VPK5 515 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 PRAMEF8Q5VWM4 474 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 PRAMEF7Q5VXH5 474 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CPLX4Q7Z7G2 160 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 PTOV1Q86YD1 416 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 LIX1LQ8IVB5 337 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MEIOBQ8N635 442 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MBD3L2Q8NHZ7 208 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 UCN2Q96RP3 112 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 CCDC106Q9BWC9 280 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 NSRP1Q9H0G5 558 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 TMEM38AQ9H6F2 299 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 EXOSC3Q9NQT5 275 aaKnown RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 COQ3Q9NZJ6 369 aa13.49□□□□□ -0.25
SCN1B-204ENST00000596348 ZNF443Q9Y2A4 671 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-204ENST00000596348 HCFC1P51610 2035 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 CDHR4A6H8M9 788 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 CCDC22O60826 627 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 TGM6O95932 706 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 GP1BBP13224 206 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 ELK4P28324 431 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 TIMP3P35625 211 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 ZNF136P52737 540 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 SESN3P58005 492 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 RAC1P63000 192 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 CYLC2Q14093 348 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-204ENST00000596348 SCARB2Q14108 478 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.255e-6■■■■□ 26.7
SCN1B-204ENST00000596348 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 RABL3Q5HYI8 236 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 NANOGP8Q6NSW7 305 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 REEP3Q6NUK4 255 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 POMZP3Q6PJE2 187 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-204ENST00000596348 CLIP4Q8N3C7 705 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 METTL25Q8N6Q8 603 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 LILRB4Q8NHJ6 448 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
SCN1B-204ENST00000596348 CA5BP1Q8WTZ4 195 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms