RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ACSM1Q08AH1 577 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 SERTAD2Q14140 314 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 THSD4Q6ZMP0 1018 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 OR52N1Q8NH53 320 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 CMC2Q9NRP2 79 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 ERVK13-1Q9NX77 482 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 H2AFY2Q9P0M6 372 aaPredicted RBP18.15■□□□□ 0.5
CLIP3-206ENST00000593074 SPAG17Q6Q759 2223 aa18.15■□□□□ 0.5
CLIP3-206ENST00000593074 PNMA8CA0A1B0GUJ8 204 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 H3BMH7 237 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 IL1AP01583 271 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 SAGP10523 405 aaPredicted RBP18.14■□□□□ 0.5
CLIP3-206ENST00000593074 ARL4DP49703 201 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 RORCP51449 518 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 PLBD1Q6P4A8 553 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 CD200R1LQ6Q8B3 271 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 LINC00114Q6XXX2 140 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 QSOX2Q6ZRP7 698 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 ZNF550Q7Z398 422 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 LHFPL3Q86UP9 236 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 SIRT6Q8N6T7 355 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 KCNS3Q9BQ31 491 aa18.14■□□□□ 0.5
CLIP3-206ENST00000593074 C19orf67A6NJJ6 358 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 PLD2O14939 933 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 HCN1O60741 890 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 PTP4A3O75365 173 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 NGFRP08138 427 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 GLB1P16278 677 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 RPS25P62851 125 aaKnown RBP18.14■□□□□ 0.49
CLIP3-206ENST00000593074 BIKQ13323 160 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLIP3-206ENST00000593074 ALG10BQ5I7T1 473 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 SPANXN2Q5MJ10 180 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 PLXDC1Q8IUK5 500 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 CARFQ8N187 725 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 BCORP1Q8N888 145 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 SLC25A46Q96AG3 418 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 IER2Q9BTL4 223 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 ABCB10Q9NRK6 738 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 LANCL2Q9NS86 450 aa18.14■□□□□ 0.49
CLIP3-206ENST00000593074 CTDSP2O14595 271 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SLC30A4O14863 429 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 IFNA16P05015 189 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 HNRNPCP07910 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SEPHS1P49903 392 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 HSD11B2P80365 405 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 KCNAB1Q14722 419 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 NNATQ16517 81 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 ARMC4Q5T2S8 1044 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 PRPF38BQ5VTL8 546 aaKnown RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 STEAP3Q658P3 488 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 MED25Q71SY5 747 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 MEPCEQ7L2J0 689 aaKnown RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SLC35F3Q8IY50 421 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SLC43A2Q8N370 569 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 KLHL36Q8N4N3 616 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 DEFB123Q8N688 67 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TMEM203Q969S6 136 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SECISBP2Q96T21 854 aaKnown RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 SNTG1Q9NSN8 517 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TNFRSF10DQ9UBN6 386 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 YARS2Q9Y2Z4 477 aaKnown RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 CEP192Q8TEP8 1941 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TRAV27A0A087WT01 109 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 IQCMA0A1B0GVH7 501 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 FAM86C2PA6NEL3 165 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TBX1O43435 398 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 DUX1O43812 170 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 HYAL3O43820 417 aaPredicted RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 LALBAP00709 142 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 FOXK2Q01167 660 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 DNASE1L3Q13609 305 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 FHL1Q13642 323 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 C22orf42Q6IC83 251 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TSSK4Q6SA08 328 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 Q8N9G6 341 aaPredicted RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 ZSCAN1Q8NBB4 408 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 KISS1RQ969F8 398 aaPredicted RBP18.13■□□□□ 0.49
CLIP3-206ENST00000593074 MED18Q9BUE0 208 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 IFT27Q9BW83 186 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 PRODH2Q9UF12 536 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 OR10H1Q9Y4A9 318 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 PCDHGB6Q9Y5F9 930 aa18.13■□□□□ 0.49
CLIP3-206ENST00000593074 TP53BP1Q12888 1972 aaPredicted RBP18.12■□□□□ 0.49
CLIP3-206ENST00000593074 PCDH15Q96QU1 1955 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 EFCAB7A8K855 629 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 AKAP8O43823 692 aaKnown RBP18.12■□□□□ 0.49
CLIP3-206ENST00000593074 OR2B3O76000 313 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 SNX4O95219 450 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 FGF9P31371 208 aaPredicted RBP18.12■□□□□ 0.49
CLIP3-206ENST00000593074 SLC35F1Q5T1Q4 408 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 ULK3Q6PHR2 472 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 KIRREL2Q6UWL6 708 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 SLC22A16Q86VW1 577 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 OR7G1Q8NGA0 311 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 KCTD7Q96MP8 289 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 CUTCQ9NTM9 273 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 BAIAP2Q9UQB8 552 aa18.12■□□□□ 0.49
CLIP3-206ENST00000593074 CDRT1O95170 752 aa18.11■□□□□ 0.49
CLIP3-206ENST00000593074 MSL3P1P0C860 447 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms