RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CBFBQ13951 182 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 SLC25A53Q5H9E4 307 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 MRPL2Q5T653 305 aaKnown RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF836Q6ZNA1 936 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 NET1Q7Z628 596 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ADGRE4PQ86SQ3 457 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 BBS10Q8TAM1 723 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ZPLD1Q8TCW7 415 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 CCT8L2Q96SF2 557 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 EXOSC3Q9NQT5 275 aaKnown RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF443Q9Y2A4 671 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-207ENST00000588542 CHST2Q9Y4C5 530 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 AP4B1Q9Y6B7 739 aa18.23■□□□□ 0.51
DDX39A-207ENST00000588542 HECTD1Q9ULT8 2610 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 C5orf58C9J3I9 102 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 EFNA2O43921 213 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 SHOX2O60902 331 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-207ENST00000588542 THBS1P07996 1170 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 IL11P20809 199 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 SCARB2Q14108 478 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 QPRTQ15274 297 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 CDSNQ15517 529 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 LIN52Q52LA3 116 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 RABL3Q5HYI8 236 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 REEP3Q6NUK4 255 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 MRGPRGQ86SM5 289 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 GGNQ86UU5 652 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 ZNF808Q8N4W9 903 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-207ENST00000588542 PCYOX1LQ8NBM8 494 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 FBXO27Q8NI29 283 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 RLIMQ9NVW2 624 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 ARL2BPQ9Y2Y0 163 aa18.22■□□□□ 0.51
DDX39A-207ENST00000588542 GPC6Q9Y625 555 aaPredicted RBP18.22■□□□□ 0.51
DDX39A-207ENST00000588542 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 CDHR4A6H8M9 788 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 CD8B2A6NJW9 211 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 H0Y3Z8 333 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 TOXO94900 526 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 CLDN1O95832 211 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 PABPC4LP0CB38 370 aaKnown RBP18.21■□□□□ 0.51
DDX39A-207ENST00000588542 ETS2P15036 469 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 PGCP20142 388 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 ADH6P28332 368 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 EIF1P41567 113 aaKnown RBP18.21■□□□□ 0.51
DDX39A-207ENST00000588542 SMSP52788 366 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 RNF220Q5VTB9 566 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 NSUN5P2Q63ZY6 315 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 ZZZ3Q8IYH5 903 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 UBQLNLQ8IYU4 475 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 CLIP4Q8N3C7 705 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 OR8J3Q8NGG0 315 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 OR10A6Q8NH74 314 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 UCN2Q96RP3 112 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 TRIB1Q96RU8 372 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 GID8Q9NWU2 228 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 ADAM21Q9UKJ8 722 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 RNF6Q9Y252 685 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 IFT52Q9Y366 437 aa18.21■□□□□ 0.51
DDX39A-207ENST00000588542 INTS1Q8N201 2190 aaKnown RBP18.21■□□□□ 0.51
DDX39A-207ENST00000588542 AP3D1O14617 1153 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 AGAP20933 346 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SLC6A2P23975 617 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 DLX5P56178 289 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SESN3P58005 492 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 RAC1P63000 192 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 RBBP4Q09028 425 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SF3B4Q15427 424 aaKnown RBP eCLIP18.2■□□□□ 0.56e-8■■■□□ 18.1
DDX39A-207ENST00000588542 CYP51A1Q16850 503 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 XKRXQ6PP77 449 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 PLXDC2Q6UX71 529 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SERPINA11Q86U17 422 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 CALHM3Q86XJ0 350 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 GRAMD2AQ8IUY3 354 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 LACC1Q8IV20 430 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 MEIOBQ8N635 442 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 HIPK4Q8NE63 616 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 ST8SIA1Q92185 356 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SMPDL3BQ92485 455 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 RND1Q92730 232 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 MRGPRX4Q96LA9 322 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 SPATA9Q9BWV2 254 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 CALHM2Q9HA72 323 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 ACER3Q9NUN7 267 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 CLCF1Q9UBD9 225 aa18.2■□□□□ 0.5
DDX39A-207ENST00000588542 NBPF19A0A087WUL8 3843 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 A0A0G2JNJ9 132 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 CLCA1A8K7I4 914 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 SEC14L5O43304 696 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 GCM2O75603 506 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-207ENST00000588542 OPN1LWP04000 364 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 ELK4P28324 431 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 CEACAM8P31997 349 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-207ENST00000588542 RYKP34925 604 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 SLC6A8P48029 635 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 HCFC1P51610 2035 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 PCBP3P57721 371 aaKnown RBP18.19■□□□□ 0.5
DDX39A-207ENST00000588542 LARS2Q15031 903 aaKnown RBP18.19■□□□□ 0.5
DDX39A-207ENST00000588542 CTU2Q2VPK5 515 aaKnown RBP18.19■□□□□ 0.5
DDX39A-207ENST00000588542 ZNF311Q5JNZ3 666 aa18.19■□□□□ 0.5
DDX39A-207ENST00000588542 RIPPLY2Q5TAB7 128 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms