RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PMS2P3Q13401 168 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 AHSA2Q719I0 299 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 GPR141Q7Z602 305 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 OR8J1Q8NGP2 316 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 OR2Y1Q8NGV0 311 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 OSTF1Q92882 214 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 DGCR14Q96DF8 476 aaKnown RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 BPIFA2Q96DR5 249 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 DPH1Q9BZG8 443 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ATP13A2Q9NQ11 1180 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 CLN6Q9NWW5 311 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 TOR4AQ9NXH8 423 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 TVP23BQ9NYZ1 205 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ERVK-18Q9QC07 812 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 TMEM5Q9Y2B1 443 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 PCDHGA1Q9Y5H4 931 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 CFAP54Q96N23 3096 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 PMS2P1A4D2B8 440 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ALG1L2C9J202 215 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 NDUFB5O43674 189 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ZFAND5O76080 213 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 MT-CO3P00414 261 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 NUDT6P53370 316 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 SNRPGP62308 76 aaKnown RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ACSM5Q6NUN0 579 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 BORAQ6PGQ7 559 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF620Q6ZNG0 422 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 MARCH3Q86UD3 253 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 LSRQ86X29 649 aaPredicted RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 OR8D4Q8NGM9 314 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 WDR36Q8NI36 951 aaKnown RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 DDA1Q9BW61 102 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 RTN4RQ9BZR6 473 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 RBM38Q9H0Z9 239 aaKnown RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 SLC25A19Q9HC21 320 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 PARD6AQ9NPB6 346 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 MEPEQ9NQ76 525 aaPredicted RBP18.19■□□□□ 0.5
TRIM47-204ENST00000587339 PSORS1C1Q9UIG5 152 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 PADI1Q9ULC6 663 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 SH3D21A4FU49 640 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 CLCA1A8K7I4 914 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 WWP2O00308 870 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 OIP5O43482 229 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 RGS10O43665 173 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 PPM1BO75688 479 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 MAKP20794 623 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 CTBP2P56545 445 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 TCF15Q12870 199 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 CLEC12AQ5QGZ9 265 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 XAF1Q6GPH4 301 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 DHRS13Q6UX07 377 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 LINC00114Q6XXX2 140 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 TMPRSS11FQ6ZWK6 438 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 TCEANCQ8N8B7 351 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 TBC1D23Q9NUY8 699 aa18.18■□□□□ 0.5
TRIM47-204ENST00000587339 TMEM200CA6NKL6 621 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PLD2O14939 933 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 HCRTR2O43614 444 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 CD63P08962 238 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 SAGP10523 405 aaPredicted RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 JUNBP17275 347 aaPredicted RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 ENDOUP21128 410 aaKnown RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 EVI2BP34910 448 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PCYT1AP49585 367 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 RAB39AQ14964 217 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 ZBED5Q49AG3 693 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 WBP2NLQ6ICG8 309 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 C6orf15Q6UXA7 325 aaPredicted RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 CLDN22Q8N7P3 220 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 SH3YL1Q96HL8 342 aaPredicted RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 Q96MT0 163 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 COPS4Q9BT78 406 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 TSSK6Q9BXA6 273 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 POLDIP3Q9BY77 421 aaKnown RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 LAT2Q9GZY6 243 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 CDH10Q9Y6N8 788 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 IGHV1-45A0A0A0MS14 117 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 UNC119BA6NIH7 251 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 H3BSA7 217 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 MRPS14O60783 128 aaKnown RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 LRP3O75074 770 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 TTKP33981 857 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 FOLR3P41439 243 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF117Q03924 483 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 EFR3AQ14156 821 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PCOLCEQ15113 449 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 TRIP6Q15654 476 aaKnown RBP18.17■□□□□ 0.5
TRIM47-204ENST00000587339 BTBD16Q32M84 506 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PRSS48Q7RTY5 328 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 C3orf49Q96BT1 292 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 DEPDC7Q96QD5 511 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 TUBA1CQ9BQE3 449 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PRRG3Q9BZD7 231 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 MYOTQ9UBF9 498 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 PCDHGB1Q9Y5G3 927 aa18.17■□□□□ 0.5
TRIM47-204ENST00000587339 A0A087WUJ7 227 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 CCDC187A0A096LP49 1063 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 GNB5O14775 395 aa18.16■□□□□ 0.5
TRIM47-204ENST00000587339 TLX2O43763 284 aaPredicted RBP18.16■□□□□ 0.5
TRIM47-204ENST00000587339 PRKYO43930 277 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms