RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 ACVR2AP27037 513 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 SLC5A2P31639 672 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 SLC9A3P48764 834 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 TMED10P49755 219 aaKnown RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 SKP2Q13309 424 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 COL9A2Q14055 689 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 NNATQ16517 81 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 ANKDD1AQ495B1 522 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 TMEM236Q5W0B7 351 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 ZNF517Q6ZMY9 492 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 CPEB2Q7Z5Q1 589 aaKnown RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 SLCO6A1Q86UG4 719 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 KIF18BQ86Y91 864 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 STX19Q8N4C7 294 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 ZNF321PQ8N8H1 164 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 APCDD1LQ8NCL9 501 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 NFAM1Q8NET5 270 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 GGHQ92820 318 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 FGF11Q92914 225 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 UBE2FQ969M7 185 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 EFHD2Q96C19 240 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 BPIFA2Q96DR5 249 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 CRB3Q9BUF7 120 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 LAT2Q9GZY6 243 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 LHPPQ9H008 270 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 FN3KQ9H479 309 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 TBC1D23Q9NUY8 699 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 MRPS18AQ9NVS2 196 aaKnown RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 CNIH4Q9P003 139 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
IFT20-213ENST00000583796 PCDHGB6Q9Y5F9 930 aa9.39□□□□□ -0.91
IFT20-213ENST00000583796 ASCC3Q8N3C0 2202 aaKnown RBP9.39□□□□□ -0.91
IFT20-213ENST00000583796 DNAH14Q0VDD8 3507 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 COL6A3P12111 3177 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 LOC102723996A0A087X1L8 192 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 A0A1W2PQ72 361 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 A8MUA0 341 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 AHCYL1O43865 530 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 REM1O75628 298 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 CDK4P11802 303 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 ABCD3P28288 659 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 GRK5P34947 590 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 GPR4P46093 362 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 NR0B1P51843 470 aaKnown RBP9.38□□□□□ -0.91
IFT20-213ENST00000583796 SLC26A5P58743 744 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 RNF4P78317 190 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 EIF3IQ13347 325 aaKnown RBP9.38□□□□□ -0.91
IFT20-213ENST00000583796 TMED1Q13445 227 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 IRF3Q14653 427 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 NCF4Q15080 339 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 SNAPC1Q16533 368 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 LPAL2Q16609 132 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PGGHGQ32M88 737 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 SYT14P1Q58G82 188 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 ARMC4Q5T2S8 1044 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PLAG1Q6DJT9 500 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PAPD4Q6PIY7 484 aaKnown RBP9.38□□□□□ -0.91
IFT20-213ENST00000583796 WDR88Q6ZMY6 472 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 LANCL3Q6ZV70 420 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 ZNF367Q7RTV3 350 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 ANKRD13BQ86YJ7 626 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PRSS58Q8IYP2 241 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 NLGN4XQ8N0W4 816 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 TCEANCQ8N8B7 351 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 FANK1Q8TC84 345 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 OMA1Q96E52 524 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PLEKHA8Q96JA3 519 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 CDC6Q99741 560 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PLA2G12AQ9BZM1 189 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 TVP23BQ9NYZ1 205 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 FLRT3Q9NZU0 649 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 ICAM5Q9UMF0 924 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
IFT20-213ENST00000583796 COL27A1Q8IZC6 1860 aaPredicted RBP9.38□□□□□ -0.91
IFT20-213ENST00000583796 BDP1A6H8Y1 2624 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 KDM4EB2RXH2 506 aaPredicted RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 GTPBP1O00178 669 aaKnown RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 PRKYO43930 277 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 CDC40O60508 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
IFT20-213ENST00000583796 CNOT3O75175 753 aaKnown RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 ENTPD6O75354 484 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 GABARAPO95166 117 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 IGHEP01854 428 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 DBTP11182 482 aaKnown RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 MASP1P48740 699 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 ST3GAL4Q11206 333 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 RAB40BQ12829 278 aa9.37□□□□□ -0.91
IFT20-213ENST00000583796 FOXD4Q12950 439 aaPredicted RBP9.37□□□□□ -0.91
IFT20-213ENST00000583796 KLHL22Q53GT1 634 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms