RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NSRP1Q9H0G5 558 aaKnown RBP22.42■■□□□ 1.18
TSEN54-209ENST00000583454 QRSL1Q9H0R6 528 aaKnown RBP22.42■■□□□ 1.18
TSEN54-209ENST00000583454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.42■■□□□ 1.18
TSEN54-209ENST00000583454 CORO2BQ9UQ03 480 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 CAMK2AQ9UQM7 478 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 VDAC3Q9Y277 283 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 SLC35A3Q9Y2D2 325 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 ZNF337Q9Y3M9 751 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 CAPN7Q9Y6W3 813 aa22.42■■□□□ 1.18
TSEN54-209ENST00000583454 EVPLLA8MZ36 301 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 SNX3O60493 162 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 CCDC22O60826 627 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 CSTAP01040 98 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ZNF708P17019 499 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ZNF17P17021 662 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 PSMA4P25789 261 aaKnown RBP22.41■■□□□ 1.18
TSEN54-209ENST00000583454 PGM1P36871 562 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ZNF41P51814 821 aaPredicted RBP22.41■■□□□ 1.18
TSEN54-209ENST00000583454 CRISP3P54108 245 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 CLDN18P56856 261 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 KCNJ10P78508 379 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 GNA13Q14344 377 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 MAPRE2Q15555 327 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 SLC25A35Q3KQZ1 300 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 PRAMEF8Q5VWM4 474 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 PRAMEF7Q5VXH5 474 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 CPLX4Q7Z7G2 160 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 OR5M1Q8NGP8 315 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 OR5W2Q8NH69 310 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ZPLD1Q8TCW7 415 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 NRGNQ92686 78 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 TMEM19Q96HH6 336 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 BCL2L10Q9HD36 194 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.41■■□□□ 1.18
TSEN54-209ENST00000583454 ARMCX1Q9P291 453 aa22.41■■□□□ 1.18
TSEN54-209ENST00000583454 A0A0G2JPF8 293 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 TMEM247A6NEH6 219 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 HNRNPCL2B2RXH8 293 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 HNRNPCL3B7ZW38 293 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 HNRNPCL1O60812 293 aaKnown RBP22.4■■□□□ 1.18
TSEN54-209ENST00000583454 EPPINO95925 133 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 BCHEP06276 602 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 HNRNPCL4P0DMR1 293 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 PEPDP12955 493 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 NFYCQ13952 458 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 SF3B4Q15427 424 aaKnown RBP eCLIP22.4■■□□□ 1.18
TSEN54-209ENST00000583454 ACSF3Q4G176 576 aaPredicted RBP22.4■■□□□ 1.18
TSEN54-209ENST00000583454 HMGN2P46Q86SG4 172 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 RELL2Q8NC24 303 aaPredicted RBP22.4■■□□□ 1.18
TSEN54-209ENST00000583454 NAXEQ8NCW5 288 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 POC1BQ8TC44 478 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 MAL2Q969L2 176 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 FAM107BQ9H098 131 aa22.4■■□□□ 1.18
TSEN54-209ENST00000583454 PRRC2AP48634 2157 aaKnown RBP22.4■■□□□ 1.18
TSEN54-209ENST00000583454 BBIP1A8MTZ0 92 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 SHISA8B8ZZ34 492 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 FAM47E-STBD1D6RA91 191 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 BCAS1O75363 584 aaPredicted RBP22.39■■□□□ 1.17
TSEN54-209ENST00000583454 DBIP07108 87 aaKnown RBP22.39■■□□□ 1.17
TSEN54-209ENST00000583454 EIF1P41567 113 aaKnown RBP22.39■■□□□ 1.17
TSEN54-209ENST00000583454 PLAURQ03405 335 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 MYBPHQ13203 477 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 POMZP3Q6PJE2 187 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 MTDHQ86UE4 582 aaKnown RBP22.39■■□□□ 1.17
TSEN54-209ENST00000583454 TMEM200AQ86VY9 491 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 SNX32Q86XE0 403 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 CMIPQ8IY22 773 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 METTL25Q8N6Q8 603 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 NPAS1Q99742 590 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 AP4B1Q9Y6B7 739 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 ACANP16112 2415 aa22.39■■□□□ 1.17
TSEN54-209ENST00000583454 MPDZO75970 2070 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 LOC100653049A0A140TA62 436 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 CLDN24A6NM45 220 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 ETV2O00321 342 aaPredicted RBP22.38■■□□□ 1.17
TSEN54-209ENST00000583454 KRT34O76011 436 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 NPPAP01160 153 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 ARAFP10398 606 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 DNAJA1P31689 397 aaKnown RBP22.38■■□□□ 1.17
TSEN54-209ENST00000583454 CLDN15P56746 228 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 TOMM34Q15785 309 aaPredicted RBP22.38■■□□□ 1.17
TSEN54-209ENST00000583454 ADRM1Q16186 407 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 TRMT5Q32P41 509 aaKnown RBP22.38■■□□□ 1.17
TSEN54-209ENST00000583454 GCNT6Q5T4J0 391 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 PIGWQ7Z7B1 504 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 ADGRE4PQ86SQ3 457 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 PEX5LQ8IYB4 626 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 ZNF524Q96C55 264 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 UCN2Q96RP3 112 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 TUBA1CQ9BQE3 449 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 CCDC106Q9BWC9 280 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 TMEM38AQ9H6F2 299 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 SLC24A3Q9HC58 644 aa22.38■■□□□ 1.17
TSEN54-209ENST00000583454 EXOSC3Q9NQT5 275 aaKnown RBP22.38■■□□□ 1.17
TSEN54-209ENST00000583454 CD8B2A6NJW9 211 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 NUDT14O95848 222 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 UBTFL6P0CB48 400 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 NID1P14543 1247 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 IL7RP16871 459 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 ADH6P28332 368 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms