RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZNF136P52737 540 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 RGS8P57771 180 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-203ENST00000580986 LY6DQ14210 128 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 GLIPR1L2Q4G1C9 344 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 FAM180AQ6UWF9 173 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 RANBP3LQ86VV4 465 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-203ENST00000580986 SIAH3Q8IW03 269 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 TMEM251Q8N6I4 163 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 SMYD1Q8NB12 490 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 GPR119Q8TDV5 335 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 NR4A3Q92570 626 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 PYURFQ96I23 114 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 MRGPRX4Q96LA9 322 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 GNRHR2Q96P88 292 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 TAAR6Q96RI8 345 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 RLIMQ9NVW2 624 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 FBXL2Q9UKC9 423 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 NINQ8N4C6 2090 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 CACNA1BQ00975 2339 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1B0GVC2 190 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 TCRBV3S1A0A5B6 114 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 FAM47E-STBD1D6RA91 191 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 G3V3Y1 287 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 GNB5O14775 395 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 CDC40O60508 579 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 HCN1O60741 890 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 BCAS1O75363 584 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 CIB2O75838 187 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 THRBP10828 461 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 CHMP24386 653 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 DPP4P27487 766 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 MSX2P35548 267 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 MAGEA2P43356 314 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 HTR3AP46098 478 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF41P51814 821 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 PPIAP62937 165 aaKnown RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 PLGLB1Q02325 96 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 INPP5JQ15735 1006 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 PLPPR5Q32ZL2 321 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 KRTCAP3Q53RY4 240 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 NHSL2Q5HYW2 709 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF613Q6PF04 617 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 SPPL2CQ8IUH8 684 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 GTPBP8Q8N3Z3 284 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 GATSQ8NAP1 163 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 HSH2DQ96JZ2 352 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 SLX1AQ9BQ83 275 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF559Q9BR84 538 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 UGT2B28Q9BY64 529 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 TRIM2Q9C040 744 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 DSN1Q9H410 356 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 IL1RAPQ9NPH3 570 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 AGPAT4Q9NRZ5 378 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 MED17Q9NVC6 651 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 TAS2R10Q9NYW0 307 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 MED11Q9P086 117 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 HEATR5AQ86XA9 2040 aa9.44□□□□□ -0.9
CCDC47-203ENST00000580986 SPENQ96T58 3664 aaKnown RBP9.44□□□□□ -0.9
CCDC47-203ENST00000580986 IGSF10Q6WRI0 2623 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 OR14I1A6ND48 311 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 J3QL48 77 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 AP3D1O14617 1153 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 TFECO14948 347 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 OIP5O43482 229 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ZIC3O60481 467 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ADAM11O75078 769 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PRKD3O94806 890 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF682O95780 498 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 IFNW1P05000 195 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 RFPL3SP0C7P2 107 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 SNRPBP14678 240 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 NQO1P15559 274 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PRKCAP17252 672 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ITGA2P17301 1181 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PSMA4P25789 261 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 GDF1P27539 372 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 APOBEC1P41238 236 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 SLC1A3P43003 542 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 MAGEA5P43359 124 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ACTR3P61158 418 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 COPZ1P61923 177 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 ALDH6A1Q02252 535 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 SLC10A1Q14973 349 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 RNFT1Q5M7Z0 435 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 C1orf146Q5VVC0 180 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 WBP2NLQ6ICG8 309 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 OR5M10Q6IEU7 315 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 FKBP9P1Q75LS8 142 aa9.43□□□□□ -0.9
CCDC47-203ENST00000580986 PIWIL3Q7Z3Z3 882 aaKnown RBP9.43□□□□□ -0.9
CCDC47-203ENST00000580986 GRINAQ7Z429 371 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms