RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ASB5Q8WWX0 329 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 RCN3Q96D15 328 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 MRGPRX4Q96LA9 322 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 TRIM8Q9BZR9 551 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 EXOSC3Q9NQT5 275 aaKnown RBP13.74□□□□□ -0.21
LITAF-217ENST00000575426 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
LITAF-217ENST00000575426 FAM215AQ9Y5M1 114 aa13.74□□□□□ -0.21
LITAF-217ENST00000575426 MED12LQ86YW9 2145 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 CLDN24A6NM45 220 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 AIM2O14862 343 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SERPINB7O75635 380 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 IL2RAP01589 272 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 GLI4P10075 376 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 GP1BBP13224 206 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 AGAP20933 346 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 CLDN18P56856 261 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 RAC1P63000 192 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 FOXF1Q12946 379 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SELPLGQ14242 412 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SGCBQ16585 318 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 TMEM44Q2T9K0 475 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 PDSS1Q5T2R2 415 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 MRPL2Q5T653 305 aaKnown RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 GKAP1Q5VSY0 366 aaPredicted RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 ZNF836Q6ZNA1 936 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SERPINA11Q86U17 422 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 VRK2Q86Y07 508 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 LACC1Q8IV20 430 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 RPRMLQ8N4K4 120 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 FAM71CQ8NEG0 241 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 FBXO27Q8NI29 283 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 ITLN2Q8WWU7 325 aaPredicted RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 ST8SIA1Q92185 356 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 CNOT9Q92600 299 aaKnown RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 SDCCAG3Q96C92 435 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 TUBA1CQ9BQE3 449 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SLC39A3Q9BRY0 314 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 SPATA9Q9BWV2 254 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 MYLK2Q9H1R3 596 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 KAT8Q9H7Z6 458 aaKnown RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 SERINC1Q9NRX5 453 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 AP3M1Q9Y2T2 418 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 RELNP78509 3460 aa13.73□□□□□ -0.21
LITAF-217ENST00000575426 USP9XQ93008 2570 aaPredicted RBP13.73□□□□□ -0.21
LITAF-217ENST00000575426 PRORSD1PA6NEY8 169 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 GJE1A6NN92 205 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 FAM107AO95990 144 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 PABPC4LP0CB38 370 aaKnown RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 PRKCAP17252 672 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 ELK4P28324 431 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 PRDX6P30041 224 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 SESN3P58005 492 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 TOMM34Q15785 309 aaPredicted RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 INTS11Q5TA45 600 aaKnown RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 RIPPLY2Q5TAB7 128 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 ZNF550Q7Z398 422 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 P4HA3Q7Z4N8 544 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 ARPINQ7Z6K5 226 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 TREML1Q86YW5 311 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 C10orf111Q8N326 155 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 MARVELD2Q8N4S9 558 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 CA5BP1Q8WTZ4 195 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 PIF1Q9H611 641 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 DNAJB12Q9NXW2 375 aaKnown RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 KIAA1549Q9HCM3 1950 aa13.72□□□□□ -0.21
LITAF-217ENST00000575426 SPTBN1Q01082 2364 aaKnown RBP13.72□□□□□ -0.21
LITAF-217ENST00000575426 CDHR4A6H8M9 788 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 CFAP73A6NFT4 308 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 CD8B2A6NJW9 211 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 CLCA1A8K7I4 914 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 HSPB2A8KAH6 182 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 EIF1AYO14602 144 aaKnown RBP13.71□□□□□ -0.21
LITAF-217ENST00000575426 DNAJA2O60884 412 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 RNF224P0DH78 156 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 CHRNB4P30926 498 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 TIMP3P35625 211 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 IDH2P48735 452 aaKnown RBP13.71□□□□□ -0.21
LITAF-217ENST00000575426 COPZ1P61923 177 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 MERTKQ12866 999 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 HSPB2Q16082 182 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 ADRM1Q16186 407 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 SLC25A53Q5H9E4 307 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 RABL3Q5HYI8 236 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 RNF220Q5VTB9 566 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 GRAMD2AQ8IUY3 354 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms