RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 IMPG1Q17R60 797 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 RFTN2Q52LD8 501 aaPredicted RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 KRTCAP3Q53RY4 240 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 ZRANB3Q5FWF4 1079 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SPANXN4Q5MJ08 99 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 GFI1BQ5VTD9 330 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 UBE2UQ5VVX9 321 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 KDM4DQ6B0I6 523 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PTRHD1Q6GMV3 140 aaKnown RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 FAHD1Q6P587 224 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PAPD4Q6PIY7 484 aaKnown RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 TBPL2Q6SJ96 375 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SPESP1Q6UW49 350 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 ISLR2Q6UXK2 745 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 TPGS1Q6ZTW0 290 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 NFE4Q86UQ8 179 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 P2RY8Q86VZ1 359 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SERPINA9Q86WD7 417 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 CENPSQ8N2Z9 138 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 ATAD1Q8NBU5 361 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 OR7A2PQ8NGA2 310 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 OR8J2Q8NGG1 315 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 OR13A1Q8NGR1 328 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PIH1D2Q8WWB5 315 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SGCDQ92629 289 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 RORBQ92753 470 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 YIPF6Q96EC8 236 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 CMTM7Q96FZ5 175 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PYURFQ96I23 114 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 UHRF2Q96PU4 802 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 OR52E6Q96RD3 313 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 ZNF300Q96RE9 604 aaPredicted RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 MCCC1Q96RQ3 725 aaPredicted RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 SEPHS2Q99611 448 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 EPYCQ99645 322 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SEPT5Q99719 369 aaPredicted RBP4.42□□□□□ -1.7
CDC27-215ENST00000573550 FUNDC2Q9BWH2 189 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PIGMQ9H3S5 423 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SP140LQ9H930 580 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 IL1RAPQ9NPH3 570 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PLCXD1Q9NUJ7 323 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 RHBDL2Q9NX52 303 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 SCN3BQ9NY72 215 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PADI2Q9Y2J8 665 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PPIL1Q9Y3C6 166 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 UGT2A1Q9Y4X1 527 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 ANGPTL3Q9Y5C1 460 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 PIKFYVEQ9Y2I7 2098 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 DENND4CQ5VZ89 1909 aa4.42□□□□□ -1.7
CDC27-215ENST00000573550 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 GLYATL1P3A0A0U1RQE8 302 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 TMEM221A6NGB7 291 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 NCF1BA6NI72 391 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 NCF1CA8MVU1 366 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 EVPLLA8MZ36 301 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CACNB4O00305 520 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 GNGT2O14610 69 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 HS3ST1O14792 307 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 ADAMDEC1O15204 470 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 ZNHIT1O43257 154 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 COCHO43405 550 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 OR1I1O60431 355 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 BCAS1O75363 584 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 GJB3O75712 270 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 AP2A2O94973 939 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CELF2O95319 508 aaKnown RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 CLIC3O95833 236 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 IGSF6O95976 241 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 RB1P06400 928 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PIRTP0C851 137 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 FAM106CPP0CH98 169 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 NCF1P14598 390 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 HMGA1P17096 107 aaKnown RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 POLR2CP19387 275 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 ELK4P28324 431 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 S100A3P33764 101 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PCGF2P35227 344 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 UGT2B10P36537 528 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CASP2P42575 452 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 ASMTP46597 345 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CCR3P51677 355 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 RHOAP61586 193 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 RPS24P62847 133 aaKnown RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 EEF1A1P68104 462 aaKnown RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 TWF1Q12792 350 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CDC20Q12834 499 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PTPRCAPQ14761 206 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 MAD2L1BPQ15013 274 aaPredicted RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 CDKN3Q16667 212 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PHKG1Q16816 387 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PNLIPRP3Q17RR3 467 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 DUOXA1Q1HG43 343 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 CTU2Q2VPK5 515 aaKnown RBP4.41□□□□□ -1.7
CDC27-215ENST00000573550 TRIM16LQ309B1 348 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 FUT11Q495W5 492 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 ZNF805Q5CZA5 627 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 PLEKHS1Q5SXH7 462 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 EEF1A1P5Q5VTE0 462 aa4.41□□□□□ -1.7
CDC27-215ENST00000573550 AGAP7PQ5VUJ5 663 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms