RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TMEM200AQ86VY9 491 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 KIF18BQ86Y91 864 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 GRAMD2AQ8IUY3 354 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 MISPQ8IVT2 679 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 ZZZ3Q8IYH5 903 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 ANKRD42Q8N9B4 389 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 GATSQ8NAP1 163 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CDS1Q92903 461 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 MOAP1Q96BY2 351 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 INTS12Q96CB8 462 aaKnown RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 C1GALT1C1Q96EU7 318 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 SFXN3Q9BWM7 321 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 NUF2Q9BZD4 464 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 DPY30Q9C005 99 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 HOXD1Q9GZZ0 328 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 JKAMPQ9P055 326 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CLCF1Q9UBD9 225 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 HAO1Q9UJM8 370 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 ITGB1BP2Q9UKP3 347 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 PCDHGB4Q9UN71 923 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 AP4B1Q9Y6B7 739 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 KCNE3Q9Y6H6 103 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 ABCA12Q86UK0 2595 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 INTS1Q8N201 2190 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 MED12Q93074 2177 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 PCNX3Q9H6A9 2034 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 A0A087WZY1 265 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 PRSS51A0A1B0GVH4 220 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 A0A1W2PQD3 144 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 TMEM120BA0PK00 339 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 TUBAL3A6NHL2 446 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 SLC22A20A6NK97 555 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 DUXAA6NLW8 204 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 EEF1E1-BLOC1S5C9J1V9 151 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 H0YC42 278 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 RNASET2O00584 256 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 SEC14L5O43304 696 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 EEF1E1O43324 174 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 HCRTR2O43614 444 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 CPSF4O95639 269 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 TGM6O95932 706 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 CRHP06850 196 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 FOSL1P15407 271 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 MATN1P21941 496 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 SLC18A1P54219 525 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 ATP12AP54707 1039 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 TPD52P55327 224 aaPredicted RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 CLDN20P56880 219 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 RPS3AP61247 264 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 SGCBQ16585 318 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 TMEM44Q2T9K0 475 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 FLYWCH1Q4VC44 716 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 BEND6Q5SZJ8 279 aaPredicted RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 DCST2Q5T1A1 773 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 ANXA8L1Q5VT79 327 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 ATG16L1Q676U5 607 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 OR2A2Q6IF42 318 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 MTERF4Q7Z6M4 381 aaKnown RBP6.69□□□□□ -1.34
NUP88-205ENST00000572809 LUZP2Q86TE4 346 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 LRRC34Q8IZ02 419 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 CLECL1Q8IZS7 167 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 GCNT2Q8N0V5 402 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 ZNF527Q8NB42 609 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 VPS37AQ8NEZ2 397 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 OR8J2Q8NGG1 315 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 OR5AK3PQ8NH89 298 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 B4GALNT2Q8NHY0 566 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 PHOSPHO1Q8TCT1 267 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 SFXN5Q8TD22 340 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 MGARPQ8TDB4 240 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 ACTRT2Q8TDY3 377 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 FIG4Q92562 907 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 OR7D2Q96RA2 312 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 SDF2Q99470 211 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 PIGMQ9H3S5 423 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 MANSC1Q9H8J5 431 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 MEAF6Q9HAF1 191 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 TMBIM4Q9HC24 238 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 THAP1Q9NVV9 213 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 VDAC3Q9Y277 283 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 KIAA1549Q9HCM3 1950 aa6.69□□□□□ -1.34
NUP88-205ENST00000572809 PDZD2O15018 2839 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 LRBAP50851 2863 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 MYO9AB2RTY4 2548 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 A8MXE2 369 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 H3BNH8 94 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 GTPBP1O00178 669 aaKnown RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 ANKRD28O15084 1053 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 SCN2BO60939 215 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 CTAG2O75638 210 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 NAT1P18440 290 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 UQCRC2P22695 453 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 SOAT1P35610 550 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 P2RX1P51575 399 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 ZNF41P51814 821 aaPredicted RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 MAGOHP61326 146 aaKnown RBP6.68□□□□□ -1.34
NUP88-205ENST00000572809 PHC1P78364 1004 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 OCRLQ01968 901 aa6.68□□□□□ -1.34
NUP88-205ENST00000572809 DAZAP2Q15038 168 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms