RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SHC1P29353 583 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 AGTR1P30556 359 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 RPS26P62854 115 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TOMM34Q15785 309 aaPredicted RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SPANXN4Q5MJ08 99 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PDZK1Q5T2W1 519 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 STAC2Q6ZMT1 411 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SPATA19Q7Z5L4 167 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ZFP90Q8TF47 636 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PPP1R36Q96LQ0 422 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TACO1Q9BSH4 297 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 OR51I1Q9H343 314 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CENPHQ9H3R5 247 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 COQ10BQ9H8M1 238 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 DLL4Q9NR61 685 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 AIG1Q9NVV5 245 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 KLHL28Q9NXS3 571 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 DSCAMO60469 2012 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ACANP16112 2415 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TRPC5OSA6NMA1 111 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 HDAC3O15379 428 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 NUDT14O95848 222 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 KLK2P20151 261 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PSMB1P20618 241 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 MAGEA8P43361 318 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 KCNJ5P48544 419 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 RAC3P60763 192 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ADAM8P78325 824 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ATAD3BQ5T9A4 648 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 HHATQ5VTY9 493 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 EIF3MQ7L2H7 374 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 C16orf62Q7Z3J2 963 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 STK32CQ86UX6 486 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SLC43A2Q8N370 569 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ARL8AQ96BM9 186 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ZNF524Q96C55 264 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TMEM185BQ9H7F4 350 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PNPOQ9NVS9 261 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 KLHL13Q9P2N7 655 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SLC35A3Q9Y2D2 325 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 NF1P21359 2839 aa15.25■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TMEM120BA0PK00 339 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SLCO1B7G3V0H7 640 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 HOXC12P31275 282 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 S100A3P33764 101 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SFTPDP35247 375 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PGM1P36871 562 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 KHKP50053 298 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PPP2R2AP63151 447 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FUT5Q11128 374 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 QPRTQ15274 297 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 GPR68Q15743 365 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TMEM176BQ3YBM2 270 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FAM174BQ3ZCQ3 159 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TYW3Q6IPR3 259 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 C3orf33Q6P1S2 294 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 C22orf34Q6ZV56 151 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ANKRD46Q86W74 232 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CXorf67Q86X51 503 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 LRRC75A-AS1Q8N1F1 130 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 GLB1L3Q8NCI6 653 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PMM1Q92871 262 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TLCD1Q96CP7 247 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 REXO5Q96IC2 774 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 MAELQ96JY0 434 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SRXN1Q9BYN0 137 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 BCO1Q9HAY6 547 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 EXOSC3Q9NQT5 275 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 MKLN1Q9UL63 735 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 GPR52Q9Y2T5 361 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 GPR45Q9Y5Y3 372 aa15.24■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ARID1AO14497 2285 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CENPVL1A0A0U1RR11 272 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CSTAP01040 98 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 OPN1LWP04000 364 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 THBDP07204 575 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 OR12D1P0DN82 309 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PGCP20142 388 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FKBP2P26885 142 aaKnown RBP15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 POU4F3Q15319 338 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 NDUFAF6Q330K2 333 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ATG16L1Q676U5 607 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FRRS1Q6ZNA5 592 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FCRLAQ7L513 359 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CLEC4FQ8N1N0 589 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ZNF619Q8N2I2 560 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TRIML2Q8N7C3 387 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ZNF614Q8N883 585 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TMEM234Q8WY98 164 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ROPN1LQ96C74 230 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TEX37Q96LM6 180 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SLC35A5Q9BS91 424 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 THUMPD3Q9BV44 507 aaKnown RBP15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 HDHD5Q9BXW7 423 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ACER3Q9NUN7 267 aa15.23■□□□□ 0.03
MAP1LC3B-208ENST00000570189 C6orf203Q9P0P8 240 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms