RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 POLR3FQ9H1D9 316 aaPredicted RBP4.9□□□□□ -1.63
KARS-208ENST00000566772 NT5DC2Q9H857 520 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 MCCC2Q9HCC0 563 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 MRPL39Q9NYK5 338 aaKnown RBP4.9□□□□□ -1.63
KARS-208ENST00000566772 PISDQ9UG56 409 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 EIF3LQ9Y262 564 aaKnown RBP4.9□□□□□ -1.63
KARS-208ENST00000566772 EXOSC1Q9Y3B2 195 aaKnown RBP4.9□□□□□ -1.63
KARS-208ENST00000566772 PHLPP2Q6ZVD8 1323 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 DOCK1Q14185 1865 aa4.9□□□□□ -1.63
KARS-208ENST00000566772 HEATR9A2RTY3 570 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 LACTBL1A8MY62 500 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 L7N2F9 121 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 FBP2O00757 339 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 OR7A17O14581 309 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 ABCD4O14678 606 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 PPIHO43447 177 aaKnown RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 FGF17O60258 216 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 SRPX2O60687 465 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 DNAJB6O75190 326 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 WBP4O75554 376 aaKnown RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 PDE5AO76074 875 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 NDUFB10O96000 172 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CD1DP15813 335 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CYP2B6P20813 491 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CAPGP40121 348 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 AP3M2P53677 418 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 SH3BGRP55822 239 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 IL9RQ01113 521 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 ENPEPQ07075 957 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 TMEM187Q14656 261 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CD226Q15762 336 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 MLF2Q15773 248 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 CCDC6Q16204 474 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CTSL3PQ5NE16 218 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 OR2A2Q6IF42 318 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 FAM71F2Q6NXP2 309 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 DBX2Q6ZNG2 339 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 SLC26A9Q7LBE3 791 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 TSEN54Q7Z6J9 526 aaKnown RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 OTUD6BQ8N6M0 293 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 OR1L4Q8NGR5 311 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 STARD8Q92502 1023 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 BIRC7Q96CA5 298 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 NTNG2Q96CW9 530 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CNRIP1Q96F85 164 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 PRICKLE1Q96MT3 831 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 SLC6A7Q99884 636 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 CITED1Q99966 193 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 SLC30A2Q9BRI3 323 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 MTG1Q9BT17 334 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 RBM4Q9BWF3 364 aaKnown RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 LRRN3Q9H3W5 708 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 IKZF5Q9H5V7 419 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 EXO5Q9H790 373 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 WDR41Q9HAD4 459 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 ADGRL4Q9HBW9 690 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 ZNF639Q9UID6 485 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 DHRS7Q9Y394 339 aa4.89□□□□□ -1.63
KARS-208ENST00000566772 RPAP1Q9BWH6 1393 aaPredicted RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 DDX60LQ5H9U9 1706 aaKnown RBP4.89□□□□□ -1.63
KARS-208ENST00000566772 COL6A3P12111 3177 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 TRBV5-4A0A0C4DH59 114 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 OR2AG2A6NM03 316 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 TM9SF1O15321 606 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 SORBS2O94875 1100 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 TSPAN12O95859 305 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 F10P00742 488 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 SP1P08047 785 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 ALOX5P09917 674 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 POU2F1P14859 743 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 H2AFXP16104 143 aaPredicted RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 PGCP20142 388 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 FCGR2CP31995 323 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 OPRL1P41146 370 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 TSFMP43897 325 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 OR1G1P47890 313 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 P2RY1P47900 373 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 POU3F4P49335 361 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 NOVA1P51513 510 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 TPMTP51580 245 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 CRYBA2P53672 197 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 ZNF85Q03923 595 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 C1orf61Q13536 156 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 EIF2B1Q14232 305 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 MESDQ14696 234 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 RAB35Q15286 201 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 LRRC66Q68CR7 880 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 FAM53AQ6NSI3 398 aaPredicted RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 APOBEC3HQ6NTF7 200 aaKnown RBP4.88□□□□□ -1.63
KARS-208ENST00000566772 ACSM5Q6NUN0 579 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 SCYL2Q6P3W7 929 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 HSD11B1LQ7Z5J1 315 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 C1QL2Q7Z5L3 287 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 KCNMB4Q86W47 210 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 DEFB123Q8N688 67 aa4.88□□□□□ -1.63
KARS-208ENST00000566772 ZNRF1Q8ND25 227 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms