RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 AGPAT4Q9NRZ5 378 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.4□□□□□ -1.22
CDH13-208ENST00000566333 SEC14L3Q9UDX4 400 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 EGFL7Q9UHF1 273 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 DKKL1Q9UK85 242 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 PRPF19Q9UMS4 504 aaKnown RBP7.4□□□□□ -1.22
CDH13-208ENST00000566333 NPIPA1Q9UND3 350 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 VDAC3Q9Y277 283 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 IFT52Q9Y366 437 aa7.4□□□□□ -1.22
CDH13-208ENST00000566333 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.22
CDH13-208ENST00000566333 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.23
CDH13-208ENST00000566333 OR2M5A3KFT3 312 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 M0R3H8 397 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 GTPBP1O00178 669 aaKnown RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 SYT5O00445 386 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 FAAHO00519 579 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 AQP7O14520 342 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CDC40O60508 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDH13-208ENST00000566333 TPST2O60704 377 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 HCN1O60741 890 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SEMA7AO75326 666 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SERPINB7O75635 380 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CYP7B1O75881 506 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 GKN3PP0CG01 181 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 EDN3P14138 238 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ZNF17P17021 662 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 HK1P19367 917 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 TNFRSF1BP20333 461 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 IL11P20809 199 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 UQCRFS1P47985 274 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ZNF41P51814 821 aaPredicted RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 HOXC5Q00444 222 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CRYZQ08257 329 aaKnown RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 CBFBQ13951 182 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 QPRTQ15274 297 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 DNAL1Q4LDG9 190 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CYBRD1Q53TN4 286 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SLC25A53Q5H9E4 307 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 NHSL2Q5HYW2 709 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 WIPI1Q5MNZ9 446 aaPredicted RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 PGM2L1Q6PCE3 622 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ASRGL1Q7L266 308 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 VTCN1Q7Z7D3 282 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ARHGAP24Q8N264 748 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 GTPBP8Q8N3Z3 284 aaPredicted RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 ST6GALNAC3Q8NDV1 305 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 OR5M1Q8NGP8 315 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 OR10Q1Q8NGQ4 319 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SLC35B4Q969S0 331 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ZBTB8AQ96BR9 441 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CCDC124Q96CT7 223 aaKnown RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 BTBD10Q9BSF8 475 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SPATA5L1Q9BVQ7 753 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 CADM1Q9BY67 442 aaKnown RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 PCDHAC1Q9H158 963 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 HHATLQ9HCP6 504 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 TAS2R10Q9NYW0 307 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 TNFRSF10DQ9UBN6 386 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 RPH3AQ9Y2J0 694 aaPredicted RBP7.39□□□□□ -1.23
CDH13-208ENST00000566333 SLC6A5Q9Y345 797 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 SNX13Q9Y5W8 968 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 ADGRG4Q8IZF6 3080 aa7.39□□□□□ -1.23
CDH13-208ENST00000566333 USP9YO00507 2555 aaPredicted RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 FREM1Q5H8C1 2179 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 A0A087WZY1 265 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 TRGV5A0A0B4J1U4 118 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 A0A1B0GTH9 108 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 CFAP73A6NFT4 308 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 GYG2O15488 501 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 SUSD5O60279 629 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 TRAPPC6AO75865 159 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 LGI1O95970 557 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 SERPINA1P01009 418 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 SEMG1P04279 462 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 FESP07332 822 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 PGCP20142 388 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 ELK4P28324 431 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 RYKP34925 604 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 SLC6A8P48029 635 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 LHX2P50458 406 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 RGS8P57771 180 aaPredicted RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 SESN3P58005 492 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 MS4A2Q01362 244 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 GABPB1Q06547 395 aaPredicted RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 BNIP2Q12982 314 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 MRPL49Q13405 166 aaKnown RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 SLC10A1Q14973 349 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 C3AR1Q16581 482 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 ZSWIM7Q19AV6 140 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 EMC4Q5J8M3 183 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 RAET1LQ5VY80 246 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 LCN8Q6JVE9 175 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 ARHGAP11AQ6P4F7 1023 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 CBLL1Q75N03 491 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 RBM45Q8IUH3 476 aaKnown RBP7.38□□□□□ -1.23
CDH13-208ENST00000566333 ZNF440Q8IYI8 595 aa7.38□□□□□ -1.23
CDH13-208ENST00000566333 ULK2Q8IYT8 1036 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms