RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IL37Q9NZH6 218 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NPAP1Q9NZP6 1156 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 OR12D3Q9UGF7 316 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 MFHAS1Q9Y4C4 1052 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NME7Q9Y5B8 376 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CSNK1G3Q9Y6M4 447 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TRIP11Q15643 1979 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 OR2M5A3KFT3 312 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FAM149AA5PLN7 773 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SAGE2PA6NJ88 616 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FXYD1O00168 92 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NR5A2O00482 541 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SPTBN2O15020 2390 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 KERAO60938 352 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UROSP10746 265 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 THRBP10828 461 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 HLA-DPA1P20036 260 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TCN1P20061 433 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 MSH3P20585 1137 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 S100A1P23297 94 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CSNK1EP49674 416 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 MN1Q10571 1320 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NME3Q13232 169 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PMS2P3Q13401 168 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 EIF4EBP2Q13542 120 aaPredicted RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 OXA1LQ15070 435 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 BCL2A1Q16548 175 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CYP51A1Q16850 503 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FUT11Q495W5 492 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 UNC50Q53HI1 259 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TTC23LQ6PF05 361 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TRAT1Q6PIZ9 186 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FUNDC1Q8IVP5 155 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PARP8Q8N3A8 854 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DEFB119Q8N690 84 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NPWQ8N729 165 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 STAG3L4Q8TBR4 150 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 AGR3Q8TD06 166 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TWIST2Q8WVJ9 160 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 CYGBQ8WWM9 190 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PIGTQ969N2 578 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TMIGD2Q96BF3 282 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 NSMCE2Q96MF7 247 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 RBM4BQ9BQ04 359 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 C19orf43Q9BQ61 176 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 MED10Q9BTT4 135 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FICDQ9BVA6 458 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 RBM4Q9BWF3 364 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 BBS2Q9BXC9 721 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ULBP1Q9BZM6 244 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DERL2Q9GZP9 239 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 DPEP3Q9H4B8 488 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 GORASP2Q9H8Y8 452 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 FBXO8Q9NRD0 319 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 PPIEQ9UNP9 301 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 AURKCQ9UQB9 309 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 WBP11Q9Y2W2 641 aaKnown RBP3.82□□□□□ -1.8
LINC00561-201ENST00000565815 TNFRSF18Q9Y5U5 241 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 SNX5Q9Y5X3 404 aa3.82□□□□□ -1.8
LINC00561-201ENST00000565815 ANAPC1Q9H1A4 1944 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 M0QX08 132 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 EI24O14681 340 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 SCELO95171 688 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FGF1P05230 155 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FYNP06241 537 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PRSS2P07478 247 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ZDHHC11BP0C7U3 371 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 IL12AP29459 219 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CD40LGP29965 261 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CCR1P32246 355 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 GSK3BP49841 420 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RAD23AP54725 363 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ERVK-8P63133 956 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CHRNB3Q05901 458 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 LTBQ06643 244 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 DMPKQ09013 629 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CDC20Q12834 499 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RALGDSQ12967 914 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 NR1D2Q14995 579 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CLPPQ16740 277 aaPredicted RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 DGUOKQ16854 277 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TRIM16LQ309B1 348 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 XKR7Q5GH72 579 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 AGAP7PQ5VUJ5 663 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 GPR107Q5VW38 600 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 KDELC1Q6UW63 502 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 CCDC80Q76M96 950 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 ISCA2Q86U28 154 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RIMKLAQ8IXN7 391 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TEX26Q8N6G2 289 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RNF148Q8N7C7 305 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 RTL3Q8N8U3 475 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 OR6C4Q8NGE1 309 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 OR4C6Q8NH72 309 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FAM216AQ8WUB2 273 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 PHF10Q8WUB8 498 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 FCGR1BQ92637 280 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 TADA1Q96BN2 335 aa3.81□□□□□ -1.8
LINC00561-201ENST00000565815 IMP4Q96G21 291 aaKnown RBP3.81□□□□□ -1.8
LINC00561-201ENST00000565815 STRADBQ9C0K7 418 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms