RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288		M0R082	166 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR5H8	P0DN80	308 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RBMX	P38159	391 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	CDK3	Q00526	305 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	IRF3	Q14653	427 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MRPL41	Q8IXM3	137 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM185A	Q8N0U4	392 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	OTUB2	Q96DC9	234 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CLEC2D	Q9UHP7	191 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SCN7A	Q01118	1682 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SNRPD1	P62314	119 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	TRA2B	P62995	288 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	NRIP3	Q9NQ35	241 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MMP26	Q9NRE1	261 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC17A6	Q9P2U8	582 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	TBC1D3K	A0A087X1G2	549 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	TBC1D3B	A6NDS4	549 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	TBC1D3F	A6NER0	549 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288		E7EQ34	232 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	GOSR2	O14653	212 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	TBC1D3G	Q6DHY5	549 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	LRRC69	Q6ZNQ3	347 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NXPE1	Q8N323	547 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NMNAT2	Q9BZQ4	307 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CDT1	Q9H211	546 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC17A5	Q9NRA2	495 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NDUFB11	Q9NX14	153 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	PCDHB10	Q9UN67	800 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RIPK3	Q9Y572	518 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NUP214	P35658	2090 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	RAB5A	P20339	215 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SOX18	P35713	384 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	PBX2	P40425	430 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SF1	Q15637	639 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	GFOD2	Q3B7J2	385 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	KCTD11	Q693B1	232 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF627	Q7L945	461 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF584	Q8IVC4	421 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SENP5	Q96HI0	755 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	ARHGAP9	Q9BRR9	750 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NIPSNAP3B	Q9BS92	247 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RAB22A	Q9UL26	194 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	DSCR3	O14972	297 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	FRK	P42685	505 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	PODNL1	Q6PEZ8	512 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CEACAM20	Q6UY09	585 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MOB3C	Q70IA8	216 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CBARP	Q8N350	705 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	WDR20	Q8TBZ3	569 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SPANXA1	Q9NS26	97 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ASF1B	Q9NVP2	202 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MYOT	Q9UBF9	498 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	LRIT2	A6NDA9	550 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR6C68	A6NDL8	312 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MMP3	P08254	477 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	DNASE1L1	P49184	302 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RPE65	Q16518	533 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC10A6	Q3KNW5	377 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR2T2	Q6IF00	324 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ACKR4	Q9NPB9	350 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	MYH13	Q9UKX3	1938 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR4E1	P0C645	316 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CHAT	P28329	748 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	BMP8B	P34820	402 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ADH7	P40394	386 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RPUSD3	Q6P087	351 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	BMP8A	Q7Z5Y6	402 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	C1orf127	Q8N9H9	656 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	LRRC15	Q8TF66	581 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	GML	Q99445	158 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CMSS1	Q9BQ75	279 aa	Known RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	MOK	Q9UQ07	419 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	KDM4F	A0A1W2PPD8	638 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	FOXE1	O00358	373 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	PLG	P00747	810 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	CRABP1	P29762	137 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	RHOA	P61586	193 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	NKPD1	Q17RQ9	610 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	MANEAL	Q5VSG8	457 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	TMEM173	Q86WV6	379 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	CPO	Q8IVL8	374 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	KRTCAP2	Q8N6L1	136 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ARRDC4	Q8NCT1	418 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR10D4P	Q8NGN7	298 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SPRYD4	Q8WW59	207 aa	Predicted RBP	4	□□□□□ -1.77
MACF1-231	ENST00000564288	HRASLS	Q9HDD0	168 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ELK1	P19419	428 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ENTPD8	Q5MY95	495 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ADPRHL1	Q8NDY3	354 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	OR4C15	Q8NGM1	316 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	UQCC1	Q9NVA1	299 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ZAR1L	A6NP61	321 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	CARD18	P57730	90 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	FABP9	Q0Z7S8	132 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	PTGES2	Q9H7Z7	377 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	ARFGEF2	Q9Y6D5	1785 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	XKRY	O14609	159 aa		4	□□□□□ -1.77
MACF1-231	ENST00000564288	SYP	P08247	313 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms