RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	NET1	Q7Z628	596 aa	Predicted RBP	4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	CEACAM19	Q7Z692	300 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	NFAM1	Q8NET5	270 aa	Predicted RBP	4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	RFESD	Q8TAC1	157 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	ACMSD	Q8TDX5	336 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	TBCK	Q8TEA7	893 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	ART4	Q93070	314 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	RAB7B	Q96AH8	199 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	TRIM9	Q9C026	710 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	ZBP1	Q9H171	429 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	PRO3102	Q9H379	93 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	DUS2	Q9NX74	493 aa	Known RBP	4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	PRODH2	Q9UF12	536 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	CFAP45	Q9UL16	551 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235		U3KQV3	271 aa		4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.22	□□□□□ -1.73
TCF12-223	ENST00000561235	NFAT5	O94916	1531 aa		4.21	□□□□□ -1.73
TCF12-223	ENST00000561235	PIEZO1	Q92508	2521 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	GOLGA6L4	A6NEF3	574 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	FBLL1	A6NHQ2	334 aa	Known RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	NPIPA2	E9PIF3	369 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	C11orf98	E9PRG8	122 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235		H3BTX0	84 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	CHAD	O15335	359 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	NEBL	O76041	1014 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ERLIN2	O94905	339 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	AK1	P00568	194 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	PIGR	P01833	764 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	TOP1	P11387	765 aa	Known RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	S100A5	P33763	92 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	CCT6A	P40227	531 aa	Known RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	HMGCS2	P54868	508 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ELP6	Q0PNE2	266 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	PDZK1IP1	Q13113	114 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ZIC1	Q15915	447 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	MAJIN	Q3KP22	176 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	KRTAP27-1	Q3LI81	207 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	RABL6	Q3YEC7	729 aa	Predicted RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	CCDC14	Q49A88	953 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	EIPR1	Q53HC9	387 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	CENPP	Q6IPU0	288 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	LEG1	Q6P5S2	330 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	NAXD	Q8IW45	347 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ITPRIP	Q8IWB1	547 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	FAM81A	Q8TBF8	368 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	THRSP	Q92748	146 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ADIPOR1	Q96A54	375 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	C11orf24	Q96F05	449 aa	Predicted RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	TM9SF3	Q9HD45	589 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	NMRK1	Q9NWW6	199 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	KLRF1	Q9NZS2	232 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF581	Q9P0T4	197 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ATP6V1H	Q9UI12	483 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	NOSIP	Q9Y314	301 aa	Known RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	DHRS7	Q9Y394	339 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	GMEB1	Q9Y692	573 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ADGRB1	O14514	1584 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	AKAP11	Q9UKA4	1901 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	SMG6	Q86US8	1419 aa	Known RBP	4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	CCDC171	Q6TFL3	1326 aa		4.21	□□□□□ -1.74
TCF12-223	ENST00000561235	ROCK2	O75116	1388 aa	Known RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235		A0A1B0GWJ7	208 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF840P	A6NDX5	716 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	LSM1	O15116	133 aa	Known RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	CLDN3	O15551	220 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	GMFG	O60234	142 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	SRPX2	O60687	465 aa	Predicted RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF354A	O60765	605 aa	Predicted RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	IDH1	O75874	414 aa	Known RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	KBTBD11	O94819	623 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	KRT6B	P04259	564 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	KRT8	P05787	483 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	PVR	P15151	417 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	IDS	P22304	550 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ADRA1A	P35348	466 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	KRT6C	P48668	564 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ARPC4	P59998	168 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	TFDP1	Q14186	410 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	RCN1	Q15293	331 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	PPP1R3A	Q16821	1122 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ARSK	Q6UWY0	536 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	VPS36	Q86VN1	386 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	CCDC50	Q8IVM0	306 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	GIPC3	Q8TF64	312 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	RANBP9	Q96S59	729 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	SLC39A3	Q9BRY0	314 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	RPP25	Q9BUL9	199 aa	Known RBP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	C1orf123	Q9NWV4	160 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	AIPL1	Q9NZN9	384 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	TMOD2	Q9NZR1	351 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	TMED5	Q9Y3A6	229 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235	BRCA2	P51587	3418 aa		4.2	□□□□□ -1.74
TCF12-223	ENST00000561235		A0A087WZY1	265 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	SPAG6	O75602	509 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	STAMBP	O95630	424 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CD9	P21926	228 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CYLC1	P35663	651 aa	Predicted RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms