RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 GPR85P60893 370 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ARG2P78540 354 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 CHRNB3Q05901 458 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 KCNAB2Q13303 367 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 PIN1Q13526 163 aaPredicted RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 OR1Q1Q15612 314 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 HYAL4Q2M3T9 481 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 TMEM44Q2T9K0 475 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 PLEKHN1Q494U1 663 aaPredicted RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 FAM98BQ52LJ0 330 aaKnown RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 EIPR1Q53HC9 387 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ZNF766Q5HY98 468 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ENTPD8Q5MY95 495 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ARSKQ6UWY0 536 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 PLCZ1Q86YW0 608 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 MISPQ8IVT2 679 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 TOR1AIP2Q8NFQ8 470 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 OR5W2Q8NH69 310 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 B4GALNT2Q8NHY0 566 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 VANGL1Q8TAA9 524 aaPredicted RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 POC1BQ8TC44 478 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 GEMIN6Q8WXD5 167 aaKnown RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 LRTOMTQ8WZ04 291 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 LZICQ8WZA0 190 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 PROX1Q92786 737 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 POP5Q969H6 163 aaKnown RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 SH3YL1Q96HL8 342 aaPredicted RBP8.52□□□□□ -1.05
HERC1-206ENST00000559996 MCHR1Q99705 422 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 PKP2Q99959 881 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 TRIM15Q9C019 465 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 EVA1AQ9H8M9 152 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 KLHL1Q9NR64 748 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ACER3Q9NUN7 267 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 KLRF1Q9NZS2 232 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 AURKCQ9UQB9 309 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 TP53TG5Q9Y2B4 290 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 ATMQ13315 3056 aa8.52□□□□□ -1.05
HERC1-206ENST00000559996 A0A0B4J2E0 115 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 A0A1B0GX12 115 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ANKUB1A6NFN9 424 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 HCRTR2O43614 444 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 FABP3P05413 133 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 RHCEP18577 417 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ENDOUP21128 410 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 PSMA4P25789 261 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 MSX1P28360 303 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 RYKP34925 604 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 IDH2P48735 452 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 CLK3P49761 638 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 SESN3P58005 492 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 RPP38P78345 283 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 FOXK2Q01167 660 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 RIPK1Q13546 671 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 SLC25A53Q5H9E4 307 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 C19orf48Q6RUI8 117 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 WDR88Q6ZMY6 472 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ZNF550Q7Z398 422 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 NKAIN4Q8IVV8 208 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ZNF440Q8IYI8 595 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ZFP62Q8NB50 900 aaPredicted RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 PIK3C3Q8NEB9 887 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 OR4C15Q8NGM1 316 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 ADAMTS16Q8TE57 1224 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 HPS1Q92902 700 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 BARD1Q99728 777 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 FAM173AQ9BQD7 235 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 CTPS2Q9NRF8 586 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 SDHAF3Q9NRP4 125 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 AGPAT4Q9NRZ5 378 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 MED17Q9NVC6 651 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 RIMS3Q9UJD0 308 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 TUBD1Q9UJT1 453 aa8.51□□□□□ -1.05
HERC1-206ENST00000559996 SPENQ96T58 3664 aaKnown RBP8.51□□□□□ -1.05
HERC1-206ENST00000559996 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 A0A1B0GWA3 101 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 CPSF4LA6NMK7 179 aaKnown RBP8.5□□□□□ -1.05
HERC1-206ENST00000559996 H3BNH8 94 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 MKRN2OSH3BPM6 223 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 CLOCKO15516 846 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 HNRNPRO43390 633 aaKnown RBP8.5□□□□□ -1.05
HERC1-206ENST00000559996 GMFGO60234 142 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 CBR3O75828 277 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 CYP7B1O75881 506 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 STAMBPO95630 424 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 IFNW1P05000 195 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 PRKCAP17252 672 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 IL11P20809 199 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 RFC3P40938 356 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 CASRP41180 1078 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 MEOX1P50221 254 aa8.5□□□□□ -1.05
HERC1-206ENST00000559996 IST1P53990 364 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms