RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 HPP00738 406 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 PCSK6P29122 969 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 EVI2BP34910 448 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 RYKP34925 604 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 CAPGP40121 348 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 NRG3P56975 720 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 NUP107P57740 925 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF117Q03924 483 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ATP1A4Q13733 1029 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ISLR2Q6UXK2 745 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 Q6ZPB1 254 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ZER1Q7Z7L7 766 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 RANBP3LQ86VV4 465 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 TAGAPQ8N103 731 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ARMC10Q8N2F6 343 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 DHRSXQ8N5I4 330 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 OR4K5Q8NGD3 323 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 CYGBQ8WWM9 190 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 OIT3Q8WWZ8 545 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 ABTB1Q969K4 478 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 SLC35B4Q969S0 331 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 GTPBP3Q969Y2 492 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 RDH12Q96NR8 316 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 PLGRKTQ9HBL7 147 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 SLC35A3Q9Y2D2 325 aa13.08□□□□□ -0.32
RABGGTA-209ENST00000559551 LOC400499M0QZD8 3231 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 ITGA10O75578 1167 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 DXOO77932 396 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 UBL4AP11441 157 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 RBMS1P29558 406 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 KRT20P35900 424 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 PTGDSP41222 190 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 SOX3P41225 446 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 GAS1P54826 345 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 TRAM2Q15035 370 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 KLHL17Q6TDP4 642 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF527Q8NB42 609 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 PSMF1Q92530 271 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 KRT84Q9NSB2 600 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 PNPLA3Q9NST1 481 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 CDV3Q9UKY7 258 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
RABGGTA-209ENST00000559551 MED12Q93074 2177 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 NCKAP5O14513 1909 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF264O43296 627 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 SCO2O43819 266 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 IGFBP1P08833 259 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ANXA8P13928 327 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 NAGAP17050 411 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 CD82P27701 267 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 IL1RL1Q01638 556 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 PRICKLE2Q7Z3G6 844 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 CCDC71Q8IV32 467 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 IL22RA1Q8N6P7 574 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 OR10G3Q8NGC4 313 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ANKRD19PQ9H560 264 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 CDCP1Q9H5V8 836 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ARMC7Q9H6L4 198 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 TMCC3Q9ULS5 477 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 H0YAE9 185 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 OR10H3O60404 316 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ANGPTL1O95841 491 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 LIFP15018 202 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 HPGDP15428 266 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 WT1P19544 449 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 UGT2B15P54855 530 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 MLF1P58340 268 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 SMIM11AP58511 58 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 PSPHP78330 225 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 CHAF1BQ13112 559 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 TOMM34Q15785 309 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 NTRK2Q16620 822 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 B3GNTL1Q67FW5 361 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 NR4A3Q92570 626 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 SPACA9Q96E40 222 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 RIBC2Q9H4K1 309 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 GALNT9Q9HCQ5 603 aa13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 EXOSC3Q9NQT5 275 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-209ENST00000559551 FAIMQ9NVQ4 179 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms