RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PLAURQ03405 335 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 CYLC2Q14093 348 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 BCL2A1Q16548 175 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 TRMT5Q32P41 509 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 LIN52Q52LA3 116 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 RIPPLY2Q5TAB7 128 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 ZNF836Q6ZNA1 936 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 MTDHQ86UE4 582 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 GRAMD2AQ8IUY3 354 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 NAXEQ8NCW5 288 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 FAM71CQ8NEG0 241 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 BBS10Q8TAM1 723 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 ASB5Q8WWX0 329 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 ZNF524Q96C55 264 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 PINK1Q9BXM7 581 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 DNAJB12Q9NXW2 375 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 STOML1Q9UBI4 398 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 ZNF443Q9Y2A4 671 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 GPC6Q9Y625 555 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 DSPPQ9NZW4 1301 aa14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 UTP20O75691 2785 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-206ENST00000558649 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CD8B2A6NJW9 211 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 BBIP1A8MTZ0 92 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 AP3D1O14617 1153 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 GPX2P18283 190 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 PSMA4P25789 261 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 GRNP28799 593 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 AQP1P29972 269 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 EIF1AXP47813 144 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CLDN15P56746 228 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 EEFSECP57772 596 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 RPS3AP61247 264 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CDK6Q00534 326 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 ART3Q13508 389 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 SCARB2Q14108 478 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 LARS2Q15031 903 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 SGCBQ16585 318 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 AP1ARQ63HQ0 302 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 GGNQ86UU5 652 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 HEATR5AQ86XA9 2040 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CMIPQ8IY22 773 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 LILRA2Q8N149 483 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 C9orf106Q8NAJ2 232 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 ZNF845Q96IR2 970 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 UCK2Q9BZX2 261 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 PIF1Q9H611 641 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CALHM2Q9HA72 323 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 RLIMQ9NVW2 624 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 CLCF1Q9UBD9 225 aa14.28□□□□□ -0.12
RABGGTA-206ENST00000558649 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MBD3L4A6NDZ8 208 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MBD3L3A6NE82 208 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MBD3L5A6NJ08 208 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SLC22A20A6NK97 555 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 HSPB2A8KAH6 182 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 TNFSF11O14788 317 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SLC22A2O15244 555 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SNX3O60493 162 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 PGM3O95394 542 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 GKN3PP0CG01 181 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 BMP5P22003 454 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SLC6A2P23975 617 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 ELK4P28324 431 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SHC1P29353 583 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 ADSLP30566 484 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 AGFG1P52594 562 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 SESN3P58005 492 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 RAC1P63000 192 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MERTKQ12866 999 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 HSPB2Q16082 182 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 RABL3Q5HYI8 236 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 ZNF311Q5JNZ3 666 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 REEP3Q6NUK4 255 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 LSRQ86X29 649 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MBD3L2Q8NHZ7 208 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 TMEM234Q8WY98 164 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 PMM1Q92871 262 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 RCN3Q96D15 328 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 MRGPRX4Q96LA9 322 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 ZNF232Q9UNY5 417 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 GMEB1Q9Y692 573 aa14.27□□□□□ -0.13
RABGGTA-206ENST00000558649 ADAM11O75078 769 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 TGM6O95932 706 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 COX4I1P13073 169 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 ADH6P28332 368 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 CEACAM8P31997 349 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 TIMP3P35625 211 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 SLC6A8P48029 635 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 IDH2P48735 452 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 EEF1A1P68104 462 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 PON3Q15166 354 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 ADRM1Q16186 407 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 COQ5Q5HYK3 327 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 PRAMEF8Q5VWM4 474 aa14.26□□□□□ -0.13
RABGGTA-206ENST00000558649 PRAMEF7Q5VXH5 474 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms