RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PCYOX1LQ8NBM8 494 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 FAM71CQ8NEG0 241 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 FBXO27Q8NI29 283 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 RP9Q8TA86 221 aaKnown RBP11.15□□□□□ -0.62
SMAD3-205ENST00000558428 CNOT9Q92600 299 aaKnown RBP11.15□□□□□ -0.62
SMAD3-205ENST00000558428 LRRC58Q96CX6 371 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 SLC39A3Q9BRY0 314 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 CCDC106Q9BWC9 280 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 TMEM38AQ9H6F2 299 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 BCL2L10Q9HD36 194 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 EXOSC3Q9NQT5 275 aaKnown RBP11.15□□□□□ -0.62
SMAD3-205ENST00000558428 GID8Q9NWU2 228 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 DNAJB12Q9NXW2 375 aaKnown RBP11.15□□□□□ -0.62
SMAD3-205ENST00000558428 RNF6Q9Y252 685 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-205ENST00000558428 AP4B1Q9Y6B7 739 aa11.15□□□□□ -0.62
SMAD3-205ENST00000558428 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CD8B2A6NJW9 211 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CLCA1A8K7I4 914 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 H0YC42 278 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 FXYD1O00168 92 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 PGM3O95394 542 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CLDN1O95832 211 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 NPPAP01160 153 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 IL2RAP01589 272 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 THBS1P07996 1170 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 COX4I1P13073 169 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 PRKCAP17252 672 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 SLC6A2P23975 617 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 PSMA4P25789 261 aaKnown RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ELK4P28324 431 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ADH6P28332 368 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CHRNB4P30926 498 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 RYKP34925 604 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 SLC6A8P48029 635 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 SUCLG1P53597 346 aaKnown RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 TPD52P55327 224 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CLDN20P56880 219 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 EEFSECP57772 596 aaKnown RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 RAC1P63000 192 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 PLAURQ03405 335 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CYP51A1Q16850 503 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 RIPPLY2Q5TAB7 128 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 NANOGP8Q6NSW7 305 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 REEP3Q6NUK4 255 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 PLXDC2Q6UX71 529 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF836Q6ZNA1 936 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 MAMDC2Q7Z304 686 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 TREML1Q86YW5 311 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CCDC71Q8IV32 467 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 OR10A6Q8NH74 314 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF563Q8TA94 476 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CA5BP1Q8WTZ4 195 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ASB5Q8WWX0 329 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF524Q96C55 264 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 RCN3Q96D15 328 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 MRGPRX4Q96LA9 322 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 TMEM185BQ9H7F4 350 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 KAT8Q9H7Z6 458 aaKnown RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 NANOGQ9H9S0 305 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CALHM2Q9HA72 323 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 RLIMQ9NVW2 624 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 FAM53CQ9NYF3 392 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 Q9UFV3 132 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF232Q9UNY5 417 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 IFT52Q9Y366 437 aa11.14□□□□□ -0.63
SMAD3-205ENST00000558428 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
SMAD3-205ENST00000558428 CDHR4A6H8M9 788 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MBD3L4A6NDZ8 208 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MBD3L3A6NE82 208 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 MBD3L5A6NJ08 208 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 EIF1AYO14602 144 aaKnown RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 DNAJA2O60884 412 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 TOXO94900 526 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 CLDN14O95500 239 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 OPN1LWP04000 364 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 PABPC4LP0CB38 370 aaKnown RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ETS2P15036 469 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 IL11P20809 199 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 SFTPDP35247 375 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 TIMP3P35625 211 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 CLDN15P56746 228 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 SESN3P58005 492 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 RPS3AP61247 264 aaKnown RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 EEF1A1P68104 462 aaKnown RBP11.13□□□□□ -0.63
SMAD3-205ENST00000558428 RBBP4Q09028 425 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 CDSNQ15517 529 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ADRM1Q16186 407 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 SLC25A53Q5H9E4 307 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ZNF311Q5JNZ3 666 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 RNF220Q5VTB9 566 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 ADGRE4PQ86SQ3 457 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 KRT73Q86Y46 540 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 PTOV1Q86YD1 416 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 C9orf106Q8NAJ2 232 aa11.13□□□□□ -0.63
SMAD3-205ENST00000558428 C11orf65Q8NCR3 313 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms