RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
PRPF39-204ENST00000553605 GPC6Q9Y625 555 aaPredicted RBP12.02□□□□□ -0.49
PRPF39-204ENST00000553605 SCDO00767 359 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 MSMBP08118 114 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 ITGA5P08648 1049 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 OR4A8P0C604 315 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 KHKP50053 298 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 RAE1P78406 368 aaKnown RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 CD226Q15762 336 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 EFNB3Q15768 340 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 ADIPOQQ15848 244 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PRSS53Q2L4Q9 553 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 CTAGE3PQ8IX95 158 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 MMGT1Q8N4V1 131 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PTGR2Q8N8N7 351 aaPredicted RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 ACTRT1Q8TDG2 376 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 UBASH3BQ8TF42 649 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PYROXD1Q8WU10 500 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 NSUN5Q96P11 429 aaKnown RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 GLIPR2Q9H4G4 154 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 UBQLN4Q9NRR5 601 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 MED29Q9NX70 200 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 EMC3Q9P0I2 261 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 RNF14Q9UBS8 474 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PCTPQ9UKL6 214 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 NFU1Q9UMS0 254 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
PRPF39-204ENST00000553605 A0A1W2PQD3 144 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 TCRBV9S1A1TA0A576 114 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 FAM159BA6NKW6 160 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 PDE5AO76074 875 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 ALX3O95076 343 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 NKX2-2O95096 273 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 BCL10O95999 233 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 PRPS1P60891 318 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 ZNF117Q03924 483 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 SELENBP1Q13228 472 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 OCLNQ16625 522 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 VHLLQ6RSH7 139 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
PRPF39-204ENST00000553605 ZAR1Q86SH2 424 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 ZCCHC24Q8N2G6 241 aaKnown RBP12□□□□□ -0.49
PRPF39-204ENST00000553605 C17orf78Q8N4C9 275 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 OR5B2Q96R09 309 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 SLC6A7Q99884 636 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
PRPF39-204ENST00000553605 EQTNQ9NQ60 294 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
PRPF39-204ENST00000553605 MALT1Q9UDY8 824 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 CMYA5Q8N3K9 4069 aa12□□□□□ -0.49
PRPF39-204ENST00000553605 LOC105371242A0A075B767 164 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 IGKV3D-15A0A087WSY6 115 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 TP73O15350 636 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 SEC31AO94979 1220 aaKnown RBP11.99□□□□□ -0.49
PRPF39-204ENST00000553605 PNPP00491 289 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 C2P06681 752 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 PRKCAP17252 672 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 DDCP20711 480 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 NTF4P34130 210 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 MAP3K8P41279 467 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 PDK3Q15120 406 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 TOMM34Q15785 309 aaPredicted RBP11.99□□□□□ -0.49
PRPF39-204ENST00000553605 VPS26BQ4G0F5 336 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 C9orf135Q5VTT2 229 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 FAM219BQ5XKK7 198 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 LETMD1Q6P1Q0 360 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 KLC3Q6P597 504 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 CBLN3Q6UW01 205 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 IKBIPQ70UQ0 350 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 CYS1Q717R9 158 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 C1orf162Q8NEQ5 155 aaPredicted RBP11.99□□□□□ -0.49
PRPF39-204ENST00000553605 OR52E4Q8NGH9 312 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 CLDND2Q8NHS1 167 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 HOXB13Q92826 284 aaPredicted RBP11.99□□□□□ -0.49
PRPF39-204ENST00000553605 KCNS3Q9BQ31 491 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 GRID1Q9ULK0 1009 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 JRKLQ9Y4A0 524 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 ACTL7BQ9Y614 415 aa11.99□□□□□ -0.49
PRPF39-204ENST00000553605 PDLIM1O00151 329 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 PPP6CO00743 305 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 MRPL33O75394 65 aaKnown RBP11.98□□□□□ -0.49
PRPF39-204ENST00000553605 KCNK2O95069 426 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 KLHL2O95198 593 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 WNT11O96014 354 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 OTCP00480 354 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 AVPP01185 164 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 PRPS2P11908 318 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 HSD3B1P14060 373 aa11.98□□□□□ -0.49
PRPF39-204ENST00000553605 CHN1P15882 459 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms