RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 TMEM5Q9Y2B1 443 aa13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 MUC22E2RYF6 1773 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRICKLE3O43900 615 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ANXA3P12429 323 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ATF1P18846 271 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 DRD5P21918 477 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR1Q1Q15612 314 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 CEBPEQ15744 281 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 PYHIN1Q6K0P9 492 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZCCHC10Q8TBK6 192 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 C10orf90Q96M02 699 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 MS4A4EQ96PG1 132 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 SDF2Q99470 211 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 HDAC8Q9BY41 377 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 HEXA-AS1Q9H8Q6 139 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ADGRL4Q9HBW9 690 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 MRPL15Q9P015 296 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 KCNE5Q9UJ90 142 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRAPPC13A5PLN9 417 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 GNRH1P01148 92 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 CRMP1Q14194 572 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 LRRC25Q8N386 305 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 LNX2Q8N448 690 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 SMPDL3BQ92485 455 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 CCDC120Q96HB5 630 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 DPCDQ9BVM2 203 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
RAPGEF3-218ENST00000548919 DUXAA6NLW8 204 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 CLTBP09497 229 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SBK2P0C263 348 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 RAB3BP20337 219 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 TP53I3Q53FA7 332 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 PXKQ7Z7A4 578 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 RANBP3LQ86VV4 465 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR4E2Q8NGC2 313 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 GCDHQ92947 438 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 CACYBPQ9HB71 228 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 EMC7Q9NPA0 242 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 ADAP2Q9NPF8 381 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 BRD7Q9NPI1 651 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 KRCC1Q9NPI7 259 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 CMC2Q9NRP2 79 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 DENND4AQ7Z401 1863 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 RNGTTO60942 597 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 TOXO94900 526 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 RAF1P04049 648 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 CCL5P13501 91 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 ARFIP1P53367 373 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SHC2P98077 582 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 ARHGAP11BQ3KRB8 267 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 WDR45BQ5MNZ6 344 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 AGBL4Q5VU57 503 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 FAAH2Q6GMR7 532 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 VN1R4Q7Z5H5 301 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 GIMAP1Q8WWP7 306 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRIM43Q96BQ3 446 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 ORAI1Q96D31 301 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 RANBP3Q9H6Z4 567 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 AUNIPQ9H7T9 357 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 GLTPQ9NZD2 209 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 COQ3Q9NZJ6 369 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF860A6NHJ4 632 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SC5DO75845 299 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 WNT1P04628 370 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 NDUFS1P28331 727 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 CTNNB1P35222 781 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 FIGNL1Q6PIW4 674 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 SLC44A3Q8N4M1 653 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 FN3KQ9H479 309 aa13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 MEPEQ9NQ76 525 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-218ENST00000548919 A0A1W2PP55 124 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms